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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
199.3
nTPM
Monaco:
229.3
nTPM
Schmiedel:
138.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
199.3
HPA sample
nTPM
gdT-cell nTPM: 99.7
Samples: 6
Max nTPM: 114.1
Min nTPM: 81.4
P10809_1007
81.4
P10809_1022
101.5
P10809_1041
114.1
P10809_1060
95.0
P10809_1077
99.7
P10809_1098
106.2
MAIT T-cell nTPM: 117.1
Samples: 6
Max nTPM: 142.8
Min nTPM: 91.6
P10809_1006
91.6
P10809_1024
138.7
P10809_1043
106.5
P10809_1062
102.8
P10809_1083
120.2
P10809_1097
142.8
Memory CD4 T-cell nTPM: 125.2
Samples: 6
Max nTPM: 145.3
Min nTPM: 98.6
P10809_1014
98.6
P10809_1026
120.2
P10809_1045
128.5
P10809_1064
124.7
P10809_1086
145.3
P10809_1113
134.0
Memory CD8 T-cell nTPM: 124.1
Samples: 5
Max nTPM: 151.4
Min nTPM: 104.1
P10809_1012
104.1
P10809_1027
123.0
P10809_1046
118.2
P10809_1065
124.0
P10809_1111
151.4
Naive CD4 T-cell nTPM: 109.7
Samples: 6
Max nTPM: 127.7
Min nTPM: 90.2
P10809_1015
91.7
P10809_1030
90.2
P10809_1049
123.6
P10809_1068
108.5
P10809_1085
127.7
P10809_1112
116.6
Naive CD8 T-cell nTPM: 105.2
Samples: 6
Max nTPM: 140.6
Min nTPM: 72.1
P10809_1016
78.2
P10809_1031
72.1
P10809_1050
101.9
P10809_1069
121.0
P10809_1087
140.6
P10809_1110
117.4
T-reg nTPM: 199.3
Samples: 6
Max nTPM: 255.9
Min nTPM: 146.8
P10809_1018
146.8
P10809_1037
237.8
P10809_1056
159.8
P10809_1075
230.2
P10809_1094
165.0
P10809_1106
255.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
229.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 181.6
Samples: 4
Max nTPM: 226.1
Min nTPM: 151.8
RHH5202_R3573
226.1
RHH5230_R3602
159.1
RHH5259_R3631
151.8
RHH5288_R3660
189.2
Effector memory CD8 T-cell nTPM: 229.3
Samples: 4
Max nTPM: 270.1
Min nTPM: 159.4
RHH5203_R3574
270.1
RHH5231_R3603
240.7
RHH5260_R3632
159.4
RHH5289_R3661
247.0
MAIT T-cell nTPM: 179.0
Samples: 4
Max nTPM: 207.9
Min nTPM: 151.8
RHH5233_R3605
207.9
RHH5205_R3576
195.0
RHH5262_R3634
151.8
RHH5297_R3663
161.3
Memory CD4 T-cell TFH nTPM: 218.0
Samples: 4
Max nTPM: 258.6
Min nTPM: 199.5
RHH5300_R3666
203.1
RHH5236_R3608
258.6
RHH5265_R3637
210.8
RHH5208_R3579
199.5
Memory CD4 T-cell Th1 nTPM: 180.6
Samples: 4
Max nTPM: 220.5
Min nTPM: 124.1
RHH5210_R3581
220.5
RHH5302_R3668
217.8
RHH5238_R3610
124.1
RHH5267_R3639
159.9
Memory CD4 T-cell Th1/Th17 nTPM: 192.1
Samples: 4
Max nTPM: 220.2
Min nTPM: 144.9
RHH5303_R3669
220.2
RHH5211_R3582
219.3
RHH5239_R3611
144.9
RHH5268_R3640
183.8
Memory CD4 T-cell Th17 nTPM: 179.0
Samples: 4
Max nTPM: 192.1
Min nTPM: 154.0
RHH5304_R3670
180.1
RHH5212_R3583
192.1
RHH5240_R3612
189.9
RHH5269_R3641
154.0
Memory CD4 T-cell Th2 nTPM: 206.8
Samples: 4
Max nTPM: 212.3
Min nTPM: 197.5
RHH5305_R3671
208.9
RHH5213_R3584
208.4
RHH5241_R3613
197.5
RHH5270_R3642
212.3
Naive CD4 T-cell nTPM: 193.6
Samples: 4
Max nTPM: 220.0
Min nTPM: 179.6
RHH5306_R3672
182.8
RHH5214_R3585
220.0
RHH5242_R3614
179.6
RHH5271_R3643
192.0
Naive CD8 T-cell nTPM: 162.4
Samples: 4
Max nTPM: 240.8
Min nTPM: 98.5
RHH5201_R3572
240.8
RHH5229_R3601
98.5
RHH5258_R3630
149.0
RHH5287_R3659
161.3
Non-Vd2 gdTCR nTPM: 184.3
Samples: 4
Max nTPM: 205.9
Min nTPM: 154.6
RHH5235_R3607
154.6
RHH5264_R3636
203.9
RHH5207_R3578
205.9
RHH5299_R3665
172.6
T-reg nTPM: 219.5
Samples: 4
Max nTPM: 282.0
Min nTPM: 170.9
RHH5301_R3667
220.2
RHH5237_R3609
282.0
RHH5266_R3638
170.9
RHH5209_R3580
204.9
Terminal effector memory CD4 T-cell nTPM: 211.9
Samples: 2
Max nTPM: 233.3
Min nTPM: 190.4
RHH5243_R3615
190.4
RHH5272_R3644
233.3
Terminal effector memory CD8 T-cell nTPM: 205.1
Samples: 4
Max nTPM: 226.3
Min nTPM: 177.6
RHH5232_R3604
198.9
RHH5204_R3575
226.3
RHH5261_R3633
177.6
RHH5296_R3662
217.4
Vd2 gdTCR nTPM: 168.3
Samples: 4
Max nTPM: 216.8
Min nTPM: 138.0
RHH5234_R3606
138.0
RHH5206_R3577
216.8
RHH5263_R3635
159.5
RHH5298_R3664
159.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.