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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
418.5
nTPM
FANTOM5:
243.5
Scaled Tags Per Million
Pig:
2.2
nTPM
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
418.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 385.4
2188
Female, age 91, both hemispheres
507.8
2090
Male, age 80, both hemispheres
415.0
2301
Female, age 85, both hemispheres
360.2
1984
Male, age 76, both hemispheres
258.6
Dorsal cochlear nucleus nTPM: 342.1
2802
Male, age 74, right hemisphere
436.9
2187
Female, age 91, both hemispheres
423.8
2370
Male, age 61, both hemispheres
350.7
2378
Male, age 80, both hemispheres
296.1
2058
Male, age 76, both hemispheres
203.2
Dorsal tegmental nucleus nTPM: 417.6
2358
Male, age 61, both hemispheres
570.0
2083
Male, age 80, both hemispheres
438.7
2326
Male, age 74, both hemispheres
383.4
1936
Male, age 76, left hemisphere
278.2
Dorsolateral tegmental area nTPM: 352.0
2337
Male, age 61, both hemispheres
445.6
2654
Male, age 80, both hemispheres
396.5
2141
Male, age 76, both hemispheres
339.1
2751
Female, age 85, both hemispheres
327.4
2360
Male, age 74, both hemispheres
251.1
Kolliker-Fuse nucleus nTPM: 410.8
2793
Female, age 91, left hemisphere
456.0
2315
Male, age 76, right hemisphere
425.5
2163
Male, age 80, both hemispheres
350.9
Lateral lemniscal nuclei nTPM: 268.5
2169
Male, age 76, both hemispheres
340.8
2453
Male, age 74, right hemisphere
323.9
2320
Female, age 91, left hemisphere
259.3
2746
Female, age 85, left hemisphere
229.3
2036
Male, age 80, both hemispheres
189.1
Lateral parabrachial nucleus nTPM: 381.8
2792
Male, age 76, both hemispheres
473.2
2013
Male, age 80, both hemispheres
372.7
2790
Male, age 61, both hemispheres
361.4
2139
Female, age 85, right hemisphere
319.7
Lateral vestibular nucleus nTPM: 372.5
2311
Male, age 80, both hemispheres
441.0
2184
Male, age 76, both hemispheres
304.1
Locus coeruleus nTPM: 315.5
2720
Male, age 74, both hemispheres
509.4
2162
Male, age 80, both hemispheres
369.1
2788
Male, age 74, unknown
344.0
2123
Female, age 91, both hemispheres
278.0
2317
Female, age 72, unknown
273.1
1980
Male, age 76, both hemispheres
236.7
2014
Male, age 55, unknown
198.2
Medial parabrachial nucleus nTPM: 391.7
2854
Male, age 80, both hemispheres
504.7
2170
Female, age 91, both hemispheres
444.4
2156
Male, age 61, both hemispheres
396.8
2786
Male, age 76, both hemispheres
378.5
2463
Female, age 85, right hemisphere
234.2
Medial periolivary nuclei nTPM: 270.3
2458
Female, age 91, both hemispheres
364.8
2063
Male, age 76, both hemispheres
271.1
2081
Male, age 80, both hemispheres
252.2
2171
Female, age 85, both hemispheres
246.3
2791
Male, age 74, right hemisphere
217.3
Motor facial nucleus nTPM: 313.4
2697
Female, age 85, both hemispheres
421.0
2795
Female, age 91, both hemispheres
398.6
2365
Male, age 74, right hemisphere
368.0
2126
Male, age 61, both hemispheres
256.0
2327
Male, age 80, both hemispheres
239.4
2062
Male, age 76, both hemispheres
197.3
Motor trigeminal nucleus nTPM: 306.3
2335
Male, age 61, both hemispheres
358.9
2309
Male, age 76, both hemispheres
358.4
2321
Female, age 91, both hemispheres
290.1
2079
Male, age 80, both hemispheres
273.2
2560
Male, age 74, both hemispheres
251.1
Nuclei of the trapezoid body nTPM: 245.1
2166
Male, age 80, both hemispheres
308.6
1983
Male, age 76, both hemispheres
289.3
2368
Female, age 91, both hemispheres
234.1
2159
Male, age 61, both hemispheres
219.7
2735
Female, age 85, both hemispheres
173.9
Nucleus raphe magnus nTPM: 294.9
2328
Male, age 80, both hemispheres
325.3
2051
Male, age 76, both hemispheres
306.2
2455
Male, age 74, both hemispheres
298.5
2172
Female, age 85, both hemispheres
297.2
2459
Female, age 91, both hemispheres
293.9
2160
Male, age 61, both hemispheres
248.4
Paramedian reticular nucleus nTPM: 300.8
2052
Male, age 76, both hemispheres
404.3
2313
Male, age 61, both hemispheres
297.3
2050
Female, age 85, both hemispheres
296.0
2057
Male, age 80, both hemispheres
205.5
Pedunculopontine tegmental nucleus nTPM: 418.5
2338
Male, age 61, both hemispheres
527.4
2334
Male, age 80, both hemispheres
435.2
1921
Female, age 85, both hemispheres
293.0
Pontine nuclei nTPM: 281.8
2319
Female, age 91, both hemispheres
380.5
2787
Female, age 85, both hemispheres
339.5
1863
Male, age 55, unknown
317.9
2454
Male, age 74, left hemisphere
285.6
1968
Male, age 76, left hemisphere
261.5
2115
Male, age 80, left hemisphere
260.3
2109
Female, age 72, unknown
236.2
2727
Male, age 61, right hemisphere
172.5
Pontine raphe nucleus nTPM: 282.2
2853
Male, age 76, midline
315.4
2122
Female, age 85, midline
249.0
Posteroventral cochlear nucleus nTPM: 379.4
2341
Male, age 80, both hemispheres
596.2
2135
Female, age 91, both hemispheres
390.1
2371
Male, age 61, both hemispheres
362.0
2070
Male, age 76, both hemispheres
277.3
2752
Female, age 85, both hemispheres
271.3
Principal sensory trigeminal nucleus nTPM: 269.0
2367
Female, age 91, left hemisphere
365.3
2324
Male, age 76, both hemispheres
302.5
2158
Male, age 61, both hemispheres
231.9
2008
Male, age 80, left hemisphere
176.5
Reticular pontine nucleus, caudal nTPM: 331.1
2457
Female, age 91, both hemispheres
384.5
2092
Male, age 76, both hemispheres
377.4
2559
Male, age 74, both hemispheres
351.8
2332
Male, age 80, right hemisphere
210.6
Reticular pontine nucleus, oral nTPM: 399.3
2366
Female, age 91, both hemispheres
577.0
2167
Male, age 76, both hemispheres
465.9
1939
Male, age 80, both hemispheres
373.4
2361
Male, age 74, both hemispheres
370.5
2012
Female, age 85, both hemispheres
209.6
Reticulotegmental nucleus nTPM: 334.7
2452
Male, age 74, both hemispheres
370.1
2322
Female, age 91, both hemispheres
339.0
2333
Male, age 80, both hemispheres
322.1
2325
Male, age 76, both hemispheres
307.5
Spinal trigeminal nucleus, oral nTPM: 325.7
2164
Male, age 80, both hemispheres
429.5
1978
Male, age 76, both hemispheres
312.8
2737
Female, age 85, both hemispheres
234.9
Subcoeruleus area nTPM: 336.3
2451
Male, age 74, both hemispheres
387.8
1958
Male, age 80, both hemispheres
385.1
2369
Female, age 85, left hemisphere
337.9
2323
Female, age 91, left hemisphere
335.9
2089
Male, age 76, left hemisphere
234.7
Superior olive nTPM: 267.5
2561
Female, age 91, both hemispheres
310.4
2020
Male, age 76, both hemispheres
306.5
2364
Male, age 74, right hemisphere
253.6
2329
Male, age 80, right hemisphere
235.7
1875
Female, age 85, both hemispheres
231.4
Ventral periolivary nuclei nTPM: 295.9
2165
Male, age 80, both hemispheres
351.1
2794
Female, age 91, left hemisphere
327.7
2023
Male, age 76, both hemispheres
288.1
2130
Female, age 85, both hemispheres
216.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 362.2
2359
Male, age 61, both hemispheres
423.5
2840
Female, age 85, both hemispheres
420.1
2161
Male, age 80, both hemispheres
376.3
1959
Male, age 76, both hemispheres
369.3
2449
Male, age 74, both hemispheres
306.2
2456
Female, age 91, both hemispheres
278.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
