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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
79.0
nTPM
Monaco:
155.2
nTPM
Schmiedel:
70.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
79.0
HPA sample
nTPM
gdT-cell nTPM: 79.0
Samples: 6
Max nTPM: 103.5
Min nTPM: 48.6
P10809_1007
48.6
P10809_1022
103.5
P10809_1041
89.0
P10809_1060
88.9
P10809_1077
67.5
P10809_1098
76.7
MAIT T-cell nTPM: 78.3
Samples: 6
Max nTPM: 96.9
Min nTPM: 60.7
P10809_1006
67.4
P10809_1024
96.9
P10809_1043
86.9
P10809_1062
76.0
P10809_1083
60.7
P10809_1097
81.9
Memory CD4 T-cell nTPM: 70.2
Samples: 6
Max nTPM: 80.1
Min nTPM: 49.5
P10809_1014
49.5
P10809_1026
74.1
P10809_1045
75.3
P10809_1064
80.1
P10809_1086
67.8
P10809_1113
74.5
Memory CD8 T-cell nTPM: 68.9
Samples: 5
Max nTPM: 87.9
Min nTPM: 50.7
P10809_1012
50.8
P10809_1027
50.7
P10809_1046
87.9
P10809_1065
77.5
P10809_1111
77.7
Naive CD4 T-cell nTPM: 60.1
Samples: 6
Max nTPM: 82.6
Min nTPM: 35.7
P10809_1015
35.7
P10809_1030
55.9
P10809_1049
71.9
P10809_1068
82.6
P10809_1085
48.6
P10809_1112
65.6
Naive CD8 T-cell nTPM: 60.7
Samples: 6
Max nTPM: 79.4
Min nTPM: 33.5
P10809_1016
33.5
P10809_1031
79.4
P10809_1050
57.8
P10809_1069
62.3
P10809_1087
65.7
P10809_1110
65.4
T-reg nTPM: 65.1
Samples: 6
Max nTPM: 95.4
Min nTPM: 38.0
P10809_1018
58.3
P10809_1037
38.0
P10809_1056
81.3
P10809_1075
62.2
P10809_1094
55.5
P10809_1106
95.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
155.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 115.9
Samples: 4
Max nTPM: 133.2
Min nTPM: 94.2
RHH5202_R3573
94.2
RHH5230_R3602
133.2
RHH5259_R3631
130.9
RHH5288_R3660
105.4
Effector memory CD8 T-cell nTPM: 150.1
Samples: 4
Max nTPM: 169.5
Min nTPM: 132.1
RHH5203_R3574
132.1
RHH5231_R3603
151.8
RHH5260_R3632
147.1
RHH5289_R3661
169.5
MAIT T-cell nTPM: 121.9
Samples: 4
Max nTPM: 136.1
Min nTPM: 110.1
RHH5233_R3605
123.3
RHH5205_R3576
118.2
RHH5262_R3634
136.1
RHH5297_R3663
110.1
Memory CD4 T-cell TFH nTPM: 112.6
Samples: 4
Max nTPM: 137.3
Min nTPM: 87.0
RHH5300_R3666
103.4
RHH5236_R3608
137.3
RHH5265_R3637
87.0
RHH5208_R3579
122.5
Memory CD4 T-cell Th1 nTPM: 114.9
Samples: 4
Max nTPM: 142.5
Min nTPM: 97.1
RHH5210_R3581
142.5
RHH5302_R3668
97.1
RHH5238_R3610
101.9
RHH5267_R3639
118.0
Memory CD4 T-cell Th1/Th17 nTPM: 121.4
Samples: 4
Max nTPM: 140.6
Min nTPM: 95.7
RHH5303_R3669
114.1
RHH5211_R3582
95.7
RHH5239_R3611
140.6
RHH5268_R3640
135.1
Memory CD4 T-cell Th17 nTPM: 117.1
Samples: 4
Max nTPM: 155.8
Min nTPM: 90.9
RHH5304_R3670
114.4
RHH5212_R3583
90.9
RHH5240_R3612
155.8
RHH5269_R3641
107.1
Memory CD4 T-cell Th2 nTPM: 113.3
Samples: 4
Max nTPM: 147.9
Min nTPM: 93.4
RHH5305_R3671
93.4
RHH5213_R3584
147.9
RHH5241_R3613
99.3
RHH5270_R3642
112.7
Naive CD4 T-cell nTPM: 89.0
Samples: 4
Max nTPM: 99.0
Min nTPM: 81.1
RHH5306_R3672
85.6
RHH5214_R3585
99.0
RHH5242_R3614
81.1
RHH5271_R3643
90.1
Naive CD8 T-cell nTPM: 90.7
Samples: 4
Max nTPM: 103.0
Min nTPM: 74.5
RHH5201_R3572
103.0
RHH5229_R3601
102.0
RHH5258_R3630
74.5
RHH5287_R3659
83.1
Non-Vd2 gdTCR nTPM: 155.2
Samples: 4
Max nTPM: 170.7
Min nTPM: 143.1
RHH5235_R3607
154.2
RHH5264_R3636
170.7
RHH5207_R3578
152.8
RHH5299_R3665
143.1
T-reg nTPM: 100.3
Samples: 4
Max nTPM: 110.1
Min nTPM: 91.6
RHH5301_R3667
93.3
RHH5237_R3609
110.1
RHH5266_R3638
106.3
RHH5209_R3580
91.6
Terminal effector memory CD4 T-cell nTPM: 139.2
Samples: 2
Max nTPM: 157.0
Min nTPM: 121.3
RHH5243_R3615
157.0
RHH5272_R3644
121.3
Terminal effector memory CD8 T-cell nTPM: 147.6
Samples: 4
Max nTPM: 193.4
Min nTPM: 123.5
RHH5232_R3604
135.7
RHH5204_R3575
123.5
RHH5261_R3633
193.4
RHH5296_R3662
137.8
Vd2 gdTCR nTPM: 119.6
Samples: 4
Max nTPM: 127.8
Min nTPM: 114.5
RHH5234_R3606
114.5
RHH5206_R3577
118.2
RHH5263_R3635
117.7
RHH5298_R3664
127.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
