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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
164.2
nTPM
Monaco:
170.1
nTPM
Schmiedel:
93.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
164.2
HPA sample
nTPM
gdT-cell nTPM: 149.3
Samples: 6
Max nTPM: 169.4
Min nTPM: 115.3
P10809_1007
140.5
P10809_1022
169.4
P10809_1041
168.7
P10809_1060
134.1
P10809_1077
115.3
P10809_1098
167.9
MAIT T-cell nTPM: 162.2
Samples: 6
Max nTPM: 194.6
Min nTPM: 137.2
P10809_1006
137.2
P10809_1024
172.7
P10809_1043
162.8
P10809_1062
167.0
P10809_1083
139.1
P10809_1097
194.6
Memory CD4 T-cell nTPM: 143.3
Samples: 6
Max nTPM: 156.3
Min nTPM: 125.5
P10809_1014
125.5
P10809_1026
144.1
P10809_1045
155.5
P10809_1064
135.5
P10809_1086
142.8
P10809_1113
156.3
Memory CD8 T-cell nTPM: 145.3
Samples: 5
Max nTPM: 174.6
Min nTPM: 117.5
P10809_1012
117.5
P10809_1027
141.8
P10809_1046
159.2
P10809_1065
133.2
P10809_1111
174.6
Naive CD4 T-cell nTPM: 164.2
Samples: 6
Max nTPM: 182.0
Min nTPM: 129.3
P10809_1015
129.3
P10809_1030
181.9
P10809_1049
182.0
P10809_1068
169.1
P10809_1085
150.7
P10809_1112
172.1
Naive CD8 T-cell nTPM: 157.2
Samples: 6
Max nTPM: 174.6
Min nTPM: 136.1
P10809_1016
149.9
P10809_1031
174.6
P10809_1050
156.2
P10809_1069
160.0
P10809_1087
136.1
P10809_1110
166.6
T-reg nTPM: 154.1
Samples: 6
Max nTPM: 186.7
Min nTPM: 116.5
P10809_1018
116.5
P10809_1037
156.3
P10809_1056
173.2
P10809_1075
131.7
P10809_1094
160.3
P10809_1106
186.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
170.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 121.1
Samples: 4
Max nTPM: 188.4
Min nTPM: 71.5
RHH5202_R3573
122.4
RHH5230_R3602
71.5
RHH5259_R3631
102.1
RHH5288_R3660
188.4
Effector memory CD8 T-cell nTPM: 117.6
Samples: 4
Max nTPM: 157.2
Min nTPM: 66.6
RHH5203_R3574
128.5
RHH5231_R3603
157.2
RHH5260_R3632
66.6
RHH5289_R3661
118.1
MAIT T-cell nTPM: 144.5
Samples: 4
Max nTPM: 195.9
Min nTPM: 76.9
RHH5233_R3605
177.4
RHH5205_R3576
76.9
RHH5262_R3634
127.7
RHH5297_R3663
195.9
Memory CD4 T-cell TFH nTPM: 148.8
Samples: 4
Max nTPM: 160.4
Min nTPM: 136.7
RHH5300_R3666
160.4
RHH5236_R3608
142.1
RHH5265_R3637
136.7
RHH5208_R3579
155.9
Memory CD4 T-cell Th1 nTPM: 123.2
Samples: 4
Max nTPM: 212.7
Min nTPM: 74.4
RHH5210_R3581
114.0
RHH5302_R3668
212.7
RHH5238_R3610
74.4
RHH5267_R3639
91.5
Memory CD4 T-cell Th1/Th17 nTPM: 143.0
Samples: 4
Max nTPM: 225.3
Min nTPM: 56.3
RHH5303_R3669
225.3
RHH5211_R3582
176.9
RHH5239_R3611
56.3
RHH5268_R3640
113.5
Memory CD4 T-cell Th17 nTPM: 109.1
Samples: 4
Max nTPM: 156.8
Min nTPM: 80.1
RHH5304_R3670
112.0
RHH5212_R3583
156.8
RHH5240_R3612
80.1
RHH5269_R3641
87.4
Memory CD4 T-cell Th2 nTPM: 131.0
Samples: 4
Max nTPM: 156.3
Min nTPM: 110.6
RHH5305_R3671
138.9
RHH5213_R3584
118.1
RHH5241_R3613
156.3
RHH5270_R3642
110.6
Naive CD4 T-cell nTPM: 139.5
Samples: 4
Max nTPM: 173.6
Min nTPM: 100.3
RHH5306_R3672
173.6
RHH5214_R3585
153.9
RHH5242_R3614
130.1
RHH5271_R3643
100.3
Naive CD8 T-cell nTPM: 143.1
Samples: 4
Max nTPM: 217.0
Min nTPM: 70.2
RHH5201_R3572
162.8
RHH5229_R3601
70.2
RHH5258_R3630
217.0
RHH5287_R3659
122.4
Non-Vd2 gdTCR nTPM: 158.2
Samples: 4
Max nTPM: 195.7
Min nTPM: 91.1
RHH5235_R3607
91.1
RHH5264_R3636
195.7
RHH5207_R3578
155.7
RHH5299_R3665
190.4
T-reg nTPM: 130.3
Samples: 4
Max nTPM: 180.5
Min nTPM: 98.4
RHH5301_R3667
180.5
RHH5237_R3609
122.9
RHH5266_R3638
98.4
RHH5209_R3580
119.2
Terminal effector memory CD4 T-cell nTPM: 126.5
Samples: 2
Max nTPM: 174.0
Min nTPM: 78.9
RHH5243_R3615
78.9
RHH5272_R3644
174.0
Terminal effector memory CD8 T-cell nTPM: 166.3
Samples: 4
Max nTPM: 205.8
Min nTPM: 94.5
RHH5232_R3604
166.0
RHH5204_R3575
205.8
RHH5261_R3633
94.5
RHH5296_R3662
199.0
Vd2 gdTCR nTPM: 170.1
Samples: 4
Max nTPM: 229.7
Min nTPM: 105.7
RHH5234_R3606
143.1
RHH5206_R3577
201.8
RHH5263_R3635
105.7
RHH5298_R3664
229.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
