We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
84.6
nTPM
Monaco:
161.3
nTPM
Schmiedel:
402.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
84.6
HPA sample
nTPM
gdT-cell nTPM: 43.0
Samples: 6
Max nTPM: 59.4
Min nTPM: 31.4
P10809_1007
44.1
P10809_1022
47.2
P10809_1041
59.4
P10809_1060
32.9
P10809_1077
31.4
P10809_1098
43.0
MAIT T-cell nTPM: 81.1
Samples: 6
Max nTPM: 113.5
Min nTPM: 46.1
P10809_1006
68.9
P10809_1024
113.5
P10809_1043
88.0
P10809_1062
83.9
P10809_1083
46.1
P10809_1097
86.4
Memory CD4 T-cell nTPM: 57.9
Samples: 6
Max nTPM: 72.6
Min nTPM: 38.6
P10809_1014
66.9
P10809_1026
68.2
P10809_1045
72.6
P10809_1064
38.6
P10809_1086
42.0
P10809_1113
59.2
Memory CD8 T-cell nTPM: 47.1
Samples: 5
Max nTPM: 58.2
Min nTPM: 31.9
P10809_1012
58.2
P10809_1027
41.4
P10809_1046
49.8
P10809_1065
31.9
P10809_1111
54.1
Naive CD4 T-cell nTPM: 84.6
Samples: 6
Max nTPM: 103.2
Min nTPM: 73.0
P10809_1015
86.3
P10809_1030
88.8
P10809_1049
103.2
P10809_1068
80.0
P10809_1085
73.0
P10809_1112
76.2
Naive CD8 T-cell nTPM: 71.2
Samples: 6
Max nTPM: 96.7
Min nTPM: 29.9
P10809_1016
96.7
P10809_1031
77.7
P10809_1050
67.2
P10809_1069
79.1
P10809_1087
29.9
P10809_1110
76.8
T-reg nTPM: 39.8
Samples: 6
Max nTPM: 49.5
Min nTPM: 27.0
P10809_1018
42.8
P10809_1037
49.5
P10809_1056
27.0
P10809_1075
43.4
P10809_1094
35.2
P10809_1106
40.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
161.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 79.6
Samples: 4
Max nTPM: 88.1
Min nTPM: 62.0
RHH5202_R3573
83.9
RHH5230_R3602
88.1
RHH5259_R3631
62.0
RHH5288_R3660
84.2
Effector memory CD8 T-cell nTPM: 60.1
Samples: 4
Max nTPM: 72.3
Min nTPM: 45.9
RHH5203_R3574
72.3
RHH5231_R3603
70.9
RHH5260_R3632
45.9
RHH5289_R3661
51.1
MAIT T-cell nTPM: 114.2
Samples: 4
Max nTPM: 116.7
Min nTPM: 111.1
RHH5233_R3605
113.9
RHH5205_R3576
111.1
RHH5262_R3634
116.7
RHH5297_R3663
114.9
Memory CD4 T-cell TFH nTPM: 101.7
Samples: 4
Max nTPM: 117.9
Min nTPM: 88.2
RHH5300_R3666
96.1
RHH5236_R3608
117.9
RHH5265_R3637
104.5
RHH5208_R3579
88.2
Memory CD4 T-cell Th1 nTPM: 89.2
Samples: 4
Max nTPM: 114.0
Min nTPM: 53.4
RHH5210_R3581
114.0
RHH5302_R3668
97.6
RHH5238_R3610
53.4
RHH5267_R3639
91.9
Memory CD4 T-cell Th1/Th17 nTPM: 99.0
Samples: 4
Max nTPM: 123.2
Min nTPM: 61.8
RHH5303_R3669
109.9
RHH5211_R3582
123.2
RHH5239_R3611
61.8
RHH5268_R3640
101.1
Memory CD4 T-cell Th17 nTPM: 115.3
Samples: 4
Max nTPM: 127.1
Min nTPM: 98.4
RHH5304_R3670
127.1
RHH5212_R3583
120.3
RHH5240_R3612
98.4
RHH5269_R3641
115.3
Memory CD4 T-cell Th2 nTPM: 117.8
Samples: 4
Max nTPM: 139.1
Min nTPM: 98.6
RHH5305_R3671
100.3
RHH5213_R3584
139.1
RHH5241_R3613
133.3
RHH5270_R3642
98.6
Naive CD4 T-cell nTPM: 161.3
Samples: 4
Max nTPM: 178.3
Min nTPM: 132.4
RHH5306_R3672
178.3
RHH5214_R3585
132.4
RHH5242_R3614
172.2
RHH5271_R3643
162.4
Naive CD8 T-cell nTPM: 157.6
Samples: 4
Max nTPM: 198.0
Min nTPM: 68.5
RHH5201_R3572
192.8
RHH5229_R3601
68.5
RHH5258_R3630
198.0
RHH5287_R3659
171.1
Non-Vd2 gdTCR nTPM: 58.6
Samples: 4
Max nTPM: 78.7
Min nTPM: 35.3
RHH5235_R3607
60.0
RHH5264_R3636
78.7
RHH5207_R3578
60.4
RHH5299_R3665
35.3
T-reg nTPM: 97.3
Samples: 4
Max nTPM: 113.0
Min nTPM: 66.5
RHH5301_R3667
106.4
RHH5237_R3609
103.4
RHH5266_R3638
113.0
RHH5209_R3580
66.5
Terminal effector memory CD4 T-cell nTPM: 63.1
Samples: 2
Max nTPM: 79.0
Min nTPM: 47.1
RHH5243_R3615
47.1
RHH5272_R3644
79.0
Terminal effector memory CD8 T-cell nTPM: 40.2
Samples: 4
Max nTPM: 53.5
Min nTPM: 25.7
RHH5232_R3604
53.5
RHH5204_R3575
25.7
RHH5261_R3633
38.4
RHH5296_R3662
43.0
Vd2 gdTCR nTPM: 80.7
Samples: 4
Max nTPM: 87.6
Min nTPM: 74.8
RHH5234_R3606
80.1
RHH5206_R3577
87.6
RHH5263_R3635
74.8
RHH5298_R3664
80.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
