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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
232.5
nTPM
Monaco:
223.6
nTPM
Schmiedel:
75.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
232.5
HPA sample
nTPM
gdT-cell nTPM: 118.4
Samples: 6
Max nTPM: 142.4
Min nTPM: 81.0
P10809_1007
81.0
P10809_1022
97.5
P10809_1041
126.0
P10809_1060
121.7
P10809_1077
142.4
P10809_1098
141.8
MAIT T-cell nTPM: 148.7
Samples: 6
Max nTPM: 181.1
Min nTPM: 96.6
P10809_1006
96.6
P10809_1024
145.4
P10809_1043
136.6
P10809_1062
164.5
P10809_1083
167.9
P10809_1097
181.1
Memory CD4 T-cell nTPM: 177.5
Samples: 6
Max nTPM: 206.1
Min nTPM: 142.7
P10809_1014
147.5
P10809_1026
186.8
P10809_1045
142.7
P10809_1064
187.9
P10809_1086
206.1
P10809_1113
193.7
Memory CD8 T-cell nTPM: 140.4
Samples: 5
Max nTPM: 181.5
Min nTPM: 106.8
P10809_1012
106.8
P10809_1027
136.5
P10809_1046
127.4
P10809_1065
149.9
P10809_1111
181.5
Naive CD4 T-cell nTPM: 154.0
Samples: 6
Max nTPM: 180.7
Min nTPM: 115.9
P10809_1015
115.9
P10809_1030
141.4
P10809_1049
173.6
P10809_1068
161.7
P10809_1085
180.7
P10809_1112
150.6
Naive CD8 T-cell nTPM: 143.1
Samples: 6
Max nTPM: 182.3
Min nTPM: 111.9
P10809_1016
111.9
P10809_1031
139.4
P10809_1050
115.9
P10809_1069
182.3
P10809_1087
181.1
P10809_1110
128.2
T-reg nTPM: 232.5
Samples: 6
Max nTPM: 259.2
Min nTPM: 182.7
P10809_1018
182.7
P10809_1037
239.6
P10809_1056
259.2
P10809_1075
249.9
P10809_1094
234.3
P10809_1106
229.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
223.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 167.6
Samples: 4
Max nTPM: 217.9
Min nTPM: 104.5
RHH5202_R3573
217.9
RHH5230_R3602
104.5
RHH5259_R3631
162.5
RHH5288_R3660
185.6
Effector memory CD8 T-cell nTPM: 130.2
Samples: 4
Max nTPM: 163.0
Min nTPM: 94.8
RHH5203_R3574
163.0
RHH5231_R3603
142.7
RHH5260_R3632
120.3
RHH5289_R3661
94.8
MAIT T-cell nTPM: 127.8
Samples: 4
Max nTPM: 159.5
Min nTPM: 88.9
RHH5233_R3605
125.9
RHH5205_R3576
88.9
RHH5262_R3634
136.9
RHH5297_R3663
159.5
Memory CD4 T-cell TFH nTPM: 222.4
Samples: 4
Max nTPM: 273.2
Min nTPM: 199.7
RHH5300_R3666
205.4
RHH5236_R3608
273.2
RHH5265_R3637
211.1
RHH5208_R3579
199.7
Memory CD4 T-cell Th1 nTPM: 177.6
Samples: 4
Max nTPM: 230.1
Min nTPM: 116.9
RHH5210_R3581
217.7
RHH5302_R3668
230.1
RHH5238_R3610
116.9
RHH5267_R3639
145.8
Memory CD4 T-cell Th1/Th17 nTPM: 179.3
Samples: 4
Max nTPM: 221.1
Min nTPM: 151.7
RHH5303_R3669
221.1
RHH5211_R3582
188.1
RHH5239_R3611
156.4
RHH5268_R3640
151.7
Memory CD4 T-cell Th17 nTPM: 177.4
Samples: 4
Max nTPM: 273.7
Min nTPM: 138.4
RHH5304_R3670
146.4
RHH5212_R3583
273.7
RHH5240_R3612
138.4
RHH5269_R3641
151.0
Memory CD4 T-cell Th2 nTPM: 183.2
Samples: 4
Max nTPM: 210.4
Min nTPM: 153.4
RHH5305_R3671
153.4
RHH5213_R3584
210.4
RHH5241_R3613
196.9
RHH5270_R3642
172.2
Naive CD4 T-cell nTPM: 190.1
Samples: 4
Max nTPM: 244.6
Min nTPM: 166.4
RHH5306_R3672
166.4
RHH5214_R3585
244.6
RHH5242_R3614
169.9
RHH5271_R3643
179.6
Naive CD8 T-cell nTPM: 148.3
Samples: 4
Max nTPM: 185.2
Min nTPM: 115.7
RHH5201_R3572
185.2
RHH5229_R3601
115.7
RHH5258_R3630
152.4
RHH5287_R3659
139.7
Non-Vd2 gdTCR nTPM: 129.3
Samples: 4
Max nTPM: 167.7
Min nTPM: 71.8
RHH5235_R3607
71.8
RHH5264_R3636
167.7
RHH5207_R3578
146.6
RHH5299_R3665
130.9
T-reg nTPM: 223.6
Samples: 4
Max nTPM: 243.5
Min nTPM: 168.9
RHH5301_R3667
242.3
RHH5237_R3609
243.5
RHH5266_R3638
168.9
RHH5209_R3580
239.5
Terminal effector memory CD4 T-cell nTPM: 134.5
Samples: 2
Max nTPM: 167.5
Min nTPM: 101.4
RHH5243_R3615
101.4
RHH5272_R3644
167.5
Terminal effector memory CD8 T-cell nTPM: 165.3
Samples: 4
Max nTPM: 279.9
Min nTPM: 117.5
RHH5232_R3604
126.5
RHH5204_R3575
279.9
RHH5261_R3633
117.5
RHH5296_R3662
137.4
Vd2 gdTCR nTPM: 143.1
Samples: 4
Max nTPM: 193.0
Min nTPM: 100.4
RHH5234_R3606
100.4
RHH5206_R3577
193.0
RHH5263_R3635
127.0
RHH5298_R3664
151.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
