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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
47.7
nTPM
HPA Brain:
98.2
nTPM
GTEx:
47.7
nTPM
FANTOM5:
55.8
Scaled Tags Per Million
Pig:
21.7
nTPM
Mouse:
41.3
nTPM
Allen mouse:
15.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
98.2
Sample id
Sample description
nTPM
Amygdala nTPM: 84.5
2695
Female, age 67, right hemisphere
95.5
2814
Male, age 76, right hemisphere
94.4
2517
Female, age 94, left hemisphere
86.7
1987
Female, age 91, left hemisphere
73.0
2514
Male, age 75, right hemisphere
73.0
Basal amygdala nTPM: 98.2
2827
Female, age 67, right hemisphere
109.5
2243
Female, age 91, right hemisphere
108.8
2685
Female, age 94, left hemisphere
107.9
2609
Male, age 75, right hemisphere
94.2
1955
Male, age 76, both hemispheres
89.8
2110
Male, age 80, left hemisphere
79.1
Central amygdala nTPM: 93.4
2826
Female, age 94, left hemisphere
104.1
2239
Male, age 80, left hemisphere
94.5
2701
Female, age 91, right hemisphere
91.6
1905
Male, age 76, both hemispheres
89.3
2515
Male, age 75, right hemisphere
87.5
Corticomedial amygdala nTPM: 87.4
2535
Female, age 67, right hemisphere
107.7
2242
Female, age 91, right hemisphere
93.4
2829
Male, age 80, left hemisphere
90.7
2240
Male, age 76, both hemispheres
80.3
2428
Male, age 75, right hemisphere
76.4
2429
Female, age 94, left hemisphere
76.1
Lateral amygdala nTPM: 95.7
2534
Female, age 94, left hemisphere
107.4
2255
Female, age 91, right hemisphere
102.0
2256
Male, age 80, left hemisphere
96.7
2830
Female, age 67, right hemisphere
94.7
1883
Male, age 76, both hemispheres
91.3
2516
Male, age 75, right hemisphere
82.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
47.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 47.7
Samples: 152
Max nTPM: 85.6
Min nTPM: 18.7
Std nTPM: 8.8
Median nTPM: 48.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
85.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
64.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
63.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
63.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
61.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
61.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
60.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
60.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
59.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
59.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
59.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
59.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
58.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
58.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
57.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
57.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
57.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
57.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
57.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
56.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
56.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
55.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
55.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
55.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
55.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
55.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
55.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
54.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
54.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
54.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
54.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
54.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
53.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
53.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
53.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
53.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
53.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
53.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
53.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
53.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
53.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
52.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
52.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
52.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
52.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
52.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
52.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
52.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
52.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
52.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
52.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
51.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
51.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
51.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
51.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
51.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
51.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
51.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
51.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
51.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
51.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
51.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
50.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
50.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
50.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
49.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
49.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
49.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
49.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
49.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
49.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
48.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
48.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
48.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
48.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
48.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
48.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
48.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
48.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
48.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
48.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
48.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
48.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
47.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
47.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
47.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
47.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
47.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
47.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
47.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
47.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
47.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
46.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
45.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
45.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
45.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
45.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
45.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
45.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
45.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
45.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
45.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
44.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
43.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
43.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
43.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
43.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
42.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
42.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
42.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
42.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
42.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
40.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
40.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
40.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
40.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
40.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
40.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
40.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
40.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
39.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
39.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
39.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
39.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
39.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
39.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
39.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
39.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
39.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
38.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
38.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
38.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
38.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
37.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
37.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
37.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
36.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
36.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
36.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
35.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
35.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
35.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
34.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
33.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
33.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
31.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
31.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
30.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
28.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
26.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
24.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
18.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
41.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 41.3
Samples: 4
Max nTPM: 44.4
Min nTPM: 39.9
Sample A
Male
40.0
Sample B
Male
41.0
Sample C
Female
44.4
Sample D
Female
39.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
