HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:49.6 nTPM
HPA Brain:98.2 nTPM
GTEx:49.6 nTPM
FANTOM5:45.4 Scaled Tags Per Million
Pig:26.5 nTPM
Mouse:38.2 nTPM
Allen mouse:13.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA076175
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 98.2
Sample id Sample description nTPM
Hippocampus
nTPM: 93.4
2621 Female, age 67, right hemisphere 108.3
2148 Female, age 91, left hemisphere 98.2
1855 Male, age 76, left hemisphere 95.4
2529 Female, age 94, left hemisphere 91.3
1911 Female, age 85, right hemisphere 88.1
1898 Male, age 80, left hemisphere 79.0
Dentate gyrus
nTPM: 92.4
2531 Female, age 67, both hemispheres 111.1
2530 Female, age 94, left hemisphere 96.7
1927 Female, age 91, both hemispheres 92.6
2246 Female, age 85, both hemispheres 89.2
2528 Male, age 74, both hemispheres 85.6
2010 Male, age 76, both hemispheres 79.5
Entorhinal gyrus
nTPM: 95.3
2613 Female, age 94, left hemisphere 110.0
1787 Male, age 76, left hemisphere 100.7
2764 Male, age 80, right hemisphere 99.7
2686 Male, age 75, right hemisphere 98.8
2117 Female, age 91, right hemisphere 82.9
1938 Female, age 85, left hemisphere 80.0
Hippocampus, CA1
nTPM: 84.4
2527 Male, age 74, both hemispheres 89.4
2082 Female, age 91, right hemisphere 88.6
1873 Female, age 85, both hemispheres 82.9
2045 Male, age 76, both hemispheres 81.7
2749 Male, age 80, left hemisphere 79.4
Hippocampus, CA2
nTPM: 84.1
2437 Female, age 94, left hemisphere 96.5
2113 Female, age 91, right hemisphere 85.5
1940 Female, age 85, left hemisphere 85.2
1892 Male, age 76, both hemispheres 84.8
1963 Male, age 80, left hemisphere 78.8
2249 Male, age 74, both hemispheres 73.9
Hippocampus, CA3
nTPM: 98.2
2861 Female, age 67, both hemispheres 129.3
2620 Female, age 94, left hemisphere 127.3
2137 Male, age 80, left hemisphere 92.4
1891 Female, age 85, both hemispheres 80.7
2436 Male, age 74, both hemispheres 80.6
1867 Male, age 76, both hemispheres 78.9
Parahippocampal cortex
nTPM: 92.0
2622 Female, age 67, right hemisphere 130.4
2532 Female, age 72, left hemisphere 102.6
2245 Female, age 91, both hemispheres 99.7
2692 Male, age 74, both hemispheres 98.0
2693 Female, age 94, both hemispheres 87.8
1933 Female, age 85, both hemispheres 86.7
1850 Male, age 80, both hemispheres 82.6
2250 Female, age 67, right hemisphere 81.4
1990 Female, age 91, right hemisphere 80.0
2018 Male, age 76, both hemispheres 70.8
Perirhinal gyrus
nTPM: 88.1
2848 Male, age 76, right hemisphere 95.1
1794 Male, age 80, right hemisphere 89.8
2521 Female, age 94, right hemisphere 89.2
1847 Female, age 91, left hemisphere 86.2
1841 Female, age 85, right hemisphere 80.0
Subiculum
nTPM: 88.1
2438 Female, age 94, left hemisphere 109.6
2619 Male, age 74, both hemispheres 103.6
2729 Female, age 91, right hemisphere 84.9
2042 Male, age 76, both hemispheres 80.1
1901 Male, age 80, both hemispheres 76.9
1977 Female, age 85, both hemispheres 73.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.6
Samples: 197

Max nTPM: 69.7
Min nTPM: 25.8
Std nTPM: 9.1
Median nTPM: 49.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 69.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 67.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 67.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 67.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 67.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 66.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 65.9
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 65.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 64.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 64.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 64.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.4
FF:10153-102I9 76 years, female 49.4
FF:10169-103B7 60 years, female 41.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.5
Pig sample Sample description nTPM
Subiculum
nTPM: 24.7
Samples: 4

Max nTPM: 30.7
Min nTPM: 20.5
Sample A Female 30.7
Sample B Female 21.6
Sample C Male 25.9
Sample D Male 20.5
Dorsal hippocampus
nTPM: 24.5
Samples: 4

Max nTPM: 28.7
Min nTPM: 21.8
Sample A Female 28.7
Sample B Female 24.3
Sample C Male 23.3
Sample D Male 21.8
Entorhinal cortex
nTPM: 26.0
Samples: 4

Max nTPM: 28.0
Min nTPM: 24.3
Sample A Female 28.0
Sample B Female 24.3
Sample C Male 26.8
Sample D Male 24.9
Ventral hippocampus
nTPM: 26.5
Samples: 4

Max nTPM: 33.2
Min nTPM: 19.3
Sample A Female 24.9
Sample B Female 19.3
Sample C Male 33.2
Sample D Male 28.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.5
Samples: 4

Max nTPM: 39.3
Min nTPM: 34.7
Sample A Male 34.7
Sample B Male 38.6
Sample C Female 37.4
Sample D Female 39.3
Hippocampal formation
nTPM: 38.2
Samples: 4

Max nTPM: 41.1
Min nTPM: 32.8
Sample A Male 32.8
Sample B Male 37.7
Sample C Female 41.0
Sample D Female 41.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.7
68799022 Antisense, RP_050217_01_H03, Mouse strain C57BL/6J (56 days, male) 13.7

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