HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:6.3 nTPM
HPA Brain:49.2 nTPM
GTEx:6.3 nTPM
FANTOM5:80.4 Scaled Tags Per Million
Pig:46.7 nTPM
Mouse:29.1 nTPM
Allen mouse:11.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA074835
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.2
Sample id Sample description nTPM
Hippocampus
nTPM: 28.4
1855 Male, age 76, left hemisphere 36.6
2621 Female, age 67, right hemisphere 29.6
1911 Female, age 85, right hemisphere 28.6
1898 Male, age 80, left hemisphere 26.8
2529 Female, age 94, left hemisphere 25.5
2148 Female, age 91, left hemisphere 23.2
Dentate gyrus
nTPM: 28.6
2010 Male, age 76, both hemispheres 31.2
1927 Female, age 91, both hemispheres 29.4
2531 Female, age 67, both hemispheres 29.1
2246 Female, age 85, both hemispheres 28.4
2530 Female, age 94, left hemisphere 27.1
2528 Male, age 74, both hemispheres 26.2
Entorhinal gyrus
nTPM: 45.5
2613 Female, age 94, left hemisphere 66.1
2764 Male, age 80, right hemisphere 49.0
1938 Female, age 85, left hemisphere 47.0
1787 Male, age 76, left hemisphere 42.2
2686 Male, age 75, right hemisphere 38.3
2117 Female, age 91, right hemisphere 30.2
Hippocampus, CA1
nTPM: 35.2
2045 Male, age 76, both hemispheres 45.3
2749 Male, age 80, left hemisphere 41.3
2527 Male, age 74, both hemispheres 34.5
2082 Female, age 91, right hemisphere 28.8
1873 Female, age 85, both hemispheres 26.2
Hippocampus, CA2
nTPM: 30.4
2249 Male, age 74, both hemispheres 32.9
2113 Female, age 91, right hemisphere 32.3
1892 Male, age 76, both hemispheres 30.5
2437 Female, age 94, left hemisphere 29.2
1963 Male, age 80, left hemisphere 28.9
1940 Female, age 85, left hemisphere 28.5
Hippocampus, CA3
nTPM: 27.5
2137 Male, age 80, left hemisphere 37.3
2436 Male, age 74, both hemispheres 28.7
1867 Male, age 76, both hemispheres 26.0
1891 Female, age 85, both hemispheres 25.9
2620 Female, age 94, left hemisphere 23.8
2861 Female, age 67, both hemispheres 23.1
Parahippocampal cortex
nTPM: 41.6
1850 Male, age 80, both hemispheres 53.0
2622 Female, age 67, right hemisphere 46.3
2532 Female, age 72, left hemisphere 45.8
1933 Female, age 85, both hemispheres 44.0
2693 Female, age 94, both hemispheres 40.8
1990 Female, age 91, right hemisphere 40.0
2245 Female, age 91, both hemispheres 38.8
2692 Male, age 74, both hemispheres 38.2
2018 Male, age 76, both hemispheres 34.4
2250 Female, age 67, right hemisphere 34.4
Perirhinal gyrus
nTPM: 49.2
2848 Male, age 76, right hemisphere 56.6
1841 Female, age 85, right hemisphere 56.5
1794 Male, age 80, right hemisphere 50.4
1847 Female, age 91, left hemisphere 45.5
2521 Female, age 94, right hemisphere 36.8
Subiculum
nTPM: 31.0
1977 Female, age 85, both hemispheres 37.1
2438 Female, age 94, left hemisphere 34.3
1901 Male, age 80, both hemispheres 31.8
2619 Male, age 74, both hemispheres 31.0
2042 Male, age 76, both hemispheres 28.9
2729 Female, age 91, right hemisphere 22.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.3
Samples: 197

Max nTPM: 13.3
Min nTPM: 0.7
Std nTPM: 1.9
Median nTPM: 6.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 13.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 11.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 11.2
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 11.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 10.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 10.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 10.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 10.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 10.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 9.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 9.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.4
FF:10153-102I9 76 years, female 88.1
FF:10169-103B7 60 years, female 72.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.7
Pig sample Sample description nTPM
Subiculum
nTPM: 43.1
Samples: 4

Max nTPM: 51.1
Min nTPM: 36.0
Sample A Female 51.1
Sample B Female 37.9
Sample C Male 47.3
Sample D Male 36.0
Dorsal hippocampus
nTPM: 34.1
Samples: 4

Max nTPM: 38.3
Min nTPM: 27.3
Sample A Female 37.6
Sample B Female 38.3
Sample C Male 33.1
Sample D Male 27.3
Entorhinal cortex
nTPM: 46.7
Samples: 4

Max nTPM: 53.5
Min nTPM: 38.6
Sample A Female 49.2
Sample B Female 38.6
Sample C Male 53.5
Sample D Male 45.4
Ventral hippocampus
nTPM: 37.1
Samples: 4

Max nTPM: 43.9
Min nTPM: 31.1
Sample A Female 37.7
Sample B Female 31.1
Sample C Male 35.7
Sample D Male 43.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.1
Samples: 4

Max nTPM: 31.2
Min nTPM: 23.4
Sample A Male 30.6
Sample B Male 31.1
Sample C Female 23.4
Sample D Female 31.2
Hippocampal formation
nTPM: 22.5
Samples: 4

Max nTPM: 24.8
Min nTPM: 20.1
Sample A Male 23.1
Sample B Male 24.8
Sample C Female 21.8
Sample D Female 20.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.2
69874138 Antisense, RP_050512_02_G02, Mouse strain C57BL/6J (56 days, male) 12.0
74882937 Antisense, RP_060315_04_H09, Mouse strain C57BL/6J (56 days, male) 10.4

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