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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
18.4
nTPM
Monaco:
184.6
nTPM
Schmiedel:
230.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
18.4
HPA sample
nTPM
gdT-cell nTPM: 17.0
Samples: 6
Max nTPM: 22.4
Min nTPM: 12.4
P10809_1007
18.1
P10809_1022
13.9
P10809_1041
22.4
P10809_1060
12.4
P10809_1077
15.1
P10809_1098
19.9
MAIT T-cell nTPM: 18.4
Samples: 6
Max nTPM: 29.4
Min nTPM: 12.4
P10809_1006
29.4
P10809_1024
15.4
P10809_1043
21.1
P10809_1062
12.4
P10809_1083
14.0
P10809_1097
18.2
Memory CD4 T-cell nTPM: 12.0
Samples: 6
Max nTPM: 20.5
Min nTPM: 7.2
P10809_1014
20.5
P10809_1026
12.0
P10809_1045
10.4
P10809_1064
7.2
P10809_1086
9.4
P10809_1113
12.4
Memory CD8 T-cell nTPM: 12.6
Samples: 5
Max nTPM: 24.3
Min nTPM: 7.8
P10809_1012
24.3
P10809_1027
8.8
P10809_1046
12.1
P10809_1065
7.8
P10809_1111
10.1
Naive CD4 T-cell nTPM: 13.4
Samples: 6
Max nTPM: 20.9
Min nTPM: 8.4
P10809_1015
20.9
P10809_1030
10.2
P10809_1049
8.4
P10809_1068
13.6
P10809_1085
13.6
P10809_1112
13.8
Naive CD8 T-cell nTPM: 10.8
Samples: 6
Max nTPM: 23.2
Min nTPM: 5.2
P10809_1016
23.2
P10809_1031
5.2
P10809_1050
8.6
P10809_1069
10.5
P10809_1087
6.9
P10809_1110
10.6
T-reg nTPM: 10.3
Samples: 6
Max nTPM: 19.2
Min nTPM: 6.3
P10809_1018
19.2
P10809_1037
8.7
P10809_1056
6.3
P10809_1075
10.0
P10809_1094
9.2
P10809_1106
8.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
184.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 157.6
Samples: 4
Max nTPM: 187.8
Min nTPM: 142.8
RHH5202_R3573
151.1
RHH5230_R3602
142.8
RHH5259_R3631
187.8
RHH5288_R3660
148.6
Effector memory CD8 T-cell nTPM: 113.1
Samples: 4
Max nTPM: 123.2
Min nTPM: 101.3
RHH5203_R3574
101.3
RHH5231_R3603
115.9
RHH5260_R3632
123.2
RHH5289_R3661
111.9
MAIT T-cell nTPM: 128.0
Samples: 4
Max nTPM: 143.0
Min nTPM: 110.9
RHH5233_R3605
110.9
RHH5205_R3576
135.9
RHH5262_R3634
143.0
RHH5297_R3663
122.0
Memory CD4 T-cell TFH nTPM: 164.6
Samples: 4
Max nTPM: 200.8
Min nTPM: 140.9
RHH5300_R3666
146.3
RHH5236_R3608
200.8
RHH5265_R3637
140.9
RHH5208_R3579
170.4
Memory CD4 T-cell Th1 nTPM: 157.3
Samples: 4
Max nTPM: 169.2
Min nTPM: 145.2
RHH5210_R3581
154.0
RHH5302_R3668
145.2
RHH5238_R3610
169.2
RHH5267_R3639
160.8
Memory CD4 T-cell Th1/Th17 nTPM: 163.2
Samples: 4
Max nTPM: 216.9
Min nTPM: 133.5
RHH5303_R3669
154.2
RHH5211_R3582
148.0
RHH5239_R3611
216.9
RHH5268_R3640
133.5
Memory CD4 T-cell Th17 nTPM: 170.3
Samples: 4
Max nTPM: 207.7
Min nTPM: 129.4
RHH5304_R3670
176.0
RHH5212_R3583
129.4
RHH5240_R3612
207.7
RHH5269_R3641
168.2
Memory CD4 T-cell Th2 nTPM: 172.0
Samples: 4
Max nTPM: 187.2
Min nTPM: 159.5
RHH5305_R3671
159.5
RHH5213_R3584
167.9
RHH5241_R3613
173.4
RHH5270_R3642
187.2
Naive CD4 T-cell nTPM: 178.3
Samples: 4
Max nTPM: 201.2
Min nTPM: 158.3
RHH5306_R3672
186.3
RHH5214_R3585
158.3
RHH5242_R3614
167.4
RHH5271_R3643
201.2
Naive CD8 T-cell nTPM: 184.7
Samples: 4
Max nTPM: 228.6
Min nTPM: 149.2
RHH5201_R3572
194.9
RHH5229_R3601
228.6
RHH5258_R3630
149.2
RHH5287_R3659
165.9
Non-Vd2 gdTCR nTPM: 107.4
Samples: 4
Max nTPM: 116.8
Min nTPM: 95.5
RHH5235_R3607
116.8
RHH5264_R3636
107.8
RHH5207_R3578
109.5
RHH5299_R3665
95.5
T-reg nTPM: 155.8
Samples: 4
Max nTPM: 187.5
Min nTPM: 130.7
RHH5301_R3667
145.5
RHH5237_R3609
130.7
RHH5266_R3638
187.5
RHH5209_R3580
159.6
Terminal effector memory CD4 T-cell nTPM: 131.5
Samples: 2
Max nTPM: 132.9
Min nTPM: 130.0
RHH5243_R3615
132.9
RHH5272_R3644
130.0
Terminal effector memory CD8 T-cell nTPM: 102.8
Samples: 4
Max nTPM: 111.8
Min nTPM: 93.9
RHH5232_R3604
98.3
RHH5204_R3575
93.9
RHH5261_R3633
107.2
RHH5296_R3662
111.8
Vd2 gdTCR nTPM: 115.4
Samples: 4
Max nTPM: 132.8
Min nTPM: 101.2
RHH5234_R3606
105.2
RHH5206_R3577
101.2
RHH5263_R3635
132.8
RHH5298_R3664
122.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
