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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
187.7
nTPM
FANTOM5:
18.4
Scaled Tags Per Million
Pig:
3.0
nTPM
Allen mouse:
0.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
187.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 171.9
2301
Female, age 85, both hemispheres
261.5
1984
Male, age 76, both hemispheres
195.9
2188
Female, age 91, both hemispheres
132.4
2090
Male, age 80, both hemispheres
97.9
Dorsal cochlear nucleus nTPM: 143.1
2378
Male, age 80, both hemispheres
232.0
2370
Male, age 61, both hemispheres
182.4
2058
Male, age 76, both hemispheres
122.6
2187
Female, age 91, both hemispheres
107.5
2802
Male, age 74, right hemisphere
70.9
Dorsal tegmental nucleus nTPM: 187.7
2358
Male, age 61, both hemispheres
443.5
2083
Male, age 80, both hemispheres
121.0
1936
Male, age 76, left hemisphere
99.0
2326
Male, age 74, both hemispheres
87.4
Dorsolateral tegmental area nTPM: 122.0
2360
Male, age 74, both hemispheres
169.7
2654
Male, age 80, both hemispheres
128.2
2337
Male, age 61, both hemispheres
127.7
2751
Female, age 85, both hemispheres
101.1
2141
Male, age 76, both hemispheres
83.5
Kolliker-Fuse nucleus nTPM: 149.3
2793
Female, age 91, left hemisphere
242.4
2315
Male, age 76, right hemisphere
110.0
2163
Male, age 80, both hemispheres
95.4
Lateral lemniscal nuclei nTPM: 122.1
2036
Male, age 80, both hemispheres
138.1
2169
Male, age 76, both hemispheres
133.5
2746
Female, age 85, left hemisphere
115.9
2320
Female, age 91, left hemisphere
115.3
2453
Male, age 74, right hemisphere
107.7
Lateral parabrachial nucleus nTPM: 103.4
2792
Male, age 76, both hemispheres
130.3
2139
Female, age 85, right hemisphere
115.5
2013
Male, age 80, both hemispheres
95.8
2790
Male, age 61, both hemispheres
72.2
Lateral vestibular nucleus nTPM: 156.7
2184
Male, age 76, both hemispheres
175.8
2311
Male, age 80, both hemispheres
137.5
Locus coeruleus nTPM: 111.5
2162
Male, age 80, both hemispheres
162.8
2788
Male, age 74, unknown
147.1
1980
Male, age 76, both hemispheres
127.9
2720
Male, age 74, both hemispheres
120.8
2014
Male, age 55, unknown
76.5
2123
Female, age 91, both hemispheres
73.0
2317
Female, age 72, unknown
72.7
Medial parabrachial nucleus nTPM: 118.2
2786
Male, age 76, both hemispheres
134.2
2170
Female, age 91, both hemispheres
123.1
2463
Female, age 85, right hemisphere
113.2
2854
Male, age 80, both hemispheres
112.0
2156
Male, age 61, both hemispheres
108.2
Medial periolivary nuclei nTPM: 134.5
2458
Female, age 91, both hemispheres
198.9
2171
Female, age 85, both hemispheres
154.4
2063
Male, age 76, both hemispheres
138.8
2081
Male, age 80, both hemispheres
116.6
2791
Male, age 74, right hemisphere
63.9
Motor facial nucleus nTPM: 134.7
2697
Female, age 85, both hemispheres
212.8
2327
Male, age 80, both hemispheres
141.3
2365
Male, age 74, right hemisphere
127.0
2062
Male, age 76, both hemispheres
126.3
2126
Male, age 61, both hemispheres
101.5
2795
Female, age 91, both hemispheres
99.3
Motor trigeminal nucleus nTPM: 119.9
2560
Male, age 74, both hemispheres
136.8
2335
Male, age 61, both hemispheres
130.6
2321
Female, age 91, both hemispheres
125.5
2309
Male, age 76, both hemispheres
112.1
2079
Male, age 80, both hemispheres
94.6
Nuclei of the trapezoid body nTPM: 168.3
2368
Female, age 91, both hemispheres
214.0
1983
Male, age 76, both hemispheres
193.3
2166
Male, age 80, both hemispheres
159.4
2735
Female, age 85, both hemispheres
147.0
2159
Male, age 61, both hemispheres
127.9
Nucleus raphe magnus nTPM: 143.1
2172
Female, age 85, both hemispheres
181.5
2459
Female, age 91, both hemispheres
171.3
2328
Male, age 80, both hemispheres
136.5
2455
Male, age 74, both hemispheres
129.3
2051
Male, age 76, both hemispheres
126.8
2160
Male, age 61, both hemispheres
113.2
Paramedian reticular nucleus nTPM: 99.9
2052
Male, age 76, both hemispheres
136.4
2057
Male, age 80, both hemispheres
115.1
2313
Male, age 61, both hemispheres
87.4
2050
Female, age 85, both hemispheres
60.9
Pedunculopontine tegmental nucleus nTPM: 111.3
2338
Male, age 61, both hemispheres
147.6
2334
Male, age 80, both hemispheres
115.2
1921
Female, age 85, both hemispheres
71.1
Pontine nuclei nTPM: 103.8
1968
Male, age 76, left hemisphere
166.9
2115
Male, age 80, left hemisphere
140.9
2454
Male, age 74, left hemisphere
123.3
2319
Female, age 91, both hemispheres
108.1
2787
Female, age 85, both hemispheres
97.4
2727
Male, age 61, right hemisphere
82.9
1863
Male, age 55, unknown
60.6
2109
Female, age 72, unknown
50.2
Pontine raphe nucleus nTPM: 103.1
2122
Female, age 85, midline
106.5
2853
Male, age 76, midline
99.7
Posteroventral cochlear nucleus nTPM: 105.4
2371
Male, age 61, both hemispheres
145.7
2341
Male, age 80, both hemispheres
116.1
2752
Female, age 85, both hemispheres
114.7
2135
Female, age 91, both hemispheres
84.6
2070
Male, age 76, both hemispheres
65.7
Principal sensory trigeminal nucleus nTPM: 136.0
2367
Female, age 91, left hemisphere
204.9
2158
Male, age 61, both hemispheres
132.6
2324
Male, age 76, both hemispheres
125.2
2008
Male, age 80, left hemisphere
81.1
Reticular pontine nucleus, caudal nTPM: 175.8
2457
Female, age 91, both hemispheres
271.5
2332
Male, age 80, right hemisphere
171.4
2559
Male, age 74, both hemispheres
153.0
2092
Male, age 76, both hemispheres
107.5
Reticular pontine nucleus, oral nTPM: 159.7
2366
Female, age 91, both hemispheres
315.2
2361
Male, age 74, both hemispheres
188.5
2167
Male, age 76, both hemispheres
141.6
2012
Female, age 85, both hemispheres
91.9
1939
Male, age 80, both hemispheres
61.2
Reticulotegmental nucleus nTPM: 116.9
2452
Male, age 74, both hemispheres
131.7
2333
Male, age 80, both hemispheres
117.6
2322
Female, age 91, both hemispheres
111.3
2325
Male, age 76, both hemispheres
107.0
Spinal trigeminal nucleus, oral nTPM: 159.7
1978
Male, age 76, both hemispheres
214.6
2164
Male, age 80, both hemispheres
134.7
2737
Female, age 85, both hemispheres
129.9
Subcoeruleus area nTPM: 91.9
2451
Male, age 74, both hemispheres
121.4
2089
Male, age 76, left hemisphere
111.2
2323
Female, age 91, left hemisphere
91.8
2369
Female, age 85, left hemisphere
71.1
1958
Male, age 80, both hemispheres
64.3
Superior olive nTPM: 159.8
2561
Female, age 91, both hemispheres
267.4
2364
Male, age 74, right hemisphere
151.7
2329
Male, age 80, right hemisphere
145.3
2020
Male, age 76, both hemispheres
140.3
1875
Female, age 85, both hemispheres
94.2
Ventral periolivary nuclei nTPM: 127.0
2165
Male, age 80, both hemispheres
179.3
2794
Female, age 91, left hemisphere
151.7
2130
Female, age 85, both hemispheres
131.0
2023
Male, age 76, both hemispheres
46.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 149.1
2161
Male, age 80, both hemispheres
188.3
2359
Male, age 61, both hemispheres
181.7
2840
Female, age 85, both hemispheres
162.1
2456
Female, age 91, both hemispheres
161.1
2449
Male, age 74, both hemispheres
123.4
1959
Male, age 76, both hemispheres
77.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
3.0
Pig sample
Sample description
nTPM
Pons nTPM: 3.1
Samples: 4
Max nTPM: 3.5
Min nTPM: 2.3
Sample A
Female
3.5
Sample B
Female
3.3
Sample C
Male
2.3
Sample D
Male
3.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
