HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:0.7 nTPM
HPA Brain:30.8 nTPM
GTEx:0.7 nTPM
FANTOM5:33.9 Scaled Tags Per Million
Pig:44.6 nTPM
Mouse:18.4 nTPM
Allen mouse:15.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023021Antibody HPA054269
Glial cells MediumNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.8
Sample id Sample description nTPM
Hippocampus
nTPM: 22.6
1898 Male, age 80, left hemisphere 29.9
1855 Male, age 76, left hemisphere 22.9
2621 Female, age 67, right hemisphere 22.6
2148 Female, age 91, left hemisphere 20.5
1911 Female, age 85, right hemisphere 20.4
2529 Female, age 94, left hemisphere 19.2
Dentate gyrus
nTPM: 24.4
1927 Female, age 91, both hemispheres 31.3
2010 Male, age 76, both hemispheres 29.0
2530 Female, age 94, left hemisphere 23.9
2528 Male, age 74, both hemispheres 21.8
2246 Female, age 85, both hemispheres 20.8
2531 Female, age 67, both hemispheres 19.7
Entorhinal gyrus
nTPM: 22.6
1938 Female, age 85, left hemisphere 26.2
2613 Female, age 94, left hemisphere 24.4
2764 Male, age 80, right hemisphere 23.9
1787 Male, age 76, left hemisphere 21.7
2117 Female, age 91, right hemisphere 21.1
2686 Male, age 75, right hemisphere 18.1
Hippocampus, CA1
nTPM: 30.8
2749 Male, age 80, left hemisphere 63.7
1873 Female, age 85, both hemispheres 25.0
2527 Male, age 74, both hemispheres 23.7
2045 Male, age 76, both hemispheres 21.5
2082 Female, age 91, right hemisphere 20.0
Hippocampus, CA2
nTPM: 24.2
1892 Male, age 76, both hemispheres 31.0
1963 Male, age 80, left hemisphere 30.6
2249 Male, age 74, both hemispheres 23.8
2113 Female, age 91, right hemisphere 20.4
1940 Female, age 85, left hemisphere 19.8
2437 Female, age 94, left hemisphere 19.4
Hippocampus, CA3
nTPM: 28.6
2137 Male, age 80, left hemisphere 55.4
1867 Male, age 76, both hemispheres 27.8
2620 Female, age 94, left hemisphere 23.6
2436 Male, age 74, both hemispheres 23.3
1891 Female, age 85, both hemispheres 21.1
2861 Female, age 67, both hemispheres 20.2
Parahippocampal cortex
nTPM: 22.4
1850 Male, age 80, both hemispheres 27.0
1990 Female, age 91, right hemisphere 25.2
2245 Female, age 91, both hemispheres 25.1
2693 Female, age 94, both hemispheres 24.4
2250 Female, age 67, right hemisphere 23.6
1933 Female, age 85, both hemispheres 23.4
2532 Female, age 72, left hemisphere 20.9
2692 Male, age 74, both hemispheres 19.7
2018 Male, age 76, both hemispheres 18.5
2622 Female, age 67, right hemisphere 16.8
Perirhinal gyrus
nTPM: 26.0
1847 Female, age 91, left hemisphere 30.7
1794 Male, age 80, right hemisphere 25.8
1841 Female, age 85, right hemisphere 25.8
2521 Female, age 94, right hemisphere 24.8
2848 Male, age 76, right hemisphere 23.0
Subiculum
nTPM: 22.6
1901 Male, age 80, both hemispheres 31.5
2042 Male, age 76, both hemispheres 25.2
1977 Female, age 85, both hemispheres 23.6
2438 Female, age 94, left hemisphere 18.7
2619 Male, age 74, both hemispheres 18.5
2729 Female, age 91, right hemisphere 18.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 0.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 0.7
Samples: 197

Max nTPM: 2.1
Min nTPM: 0.0
Std nTPM: 0.3
Median nTPM: 0.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 2.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 2.0
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 1.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 1.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 1.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 1.6
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 1.5
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 1.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 1.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 1.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 1.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.9
FF:10169-103B7 60 years, female 39.4
FF:10153-102I9 76 years, female 28.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.6
Pig sample Sample description nTPM
Subiculum
nTPM: 43.6
Samples: 4

Max nTPM: 51.9
Min nTPM: 38.1
Sample A Female 51.9
Sample B Female 38.1
Sample C Male 45.3
Sample D Male 39.1
Dorsal hippocampus
nTPM: 44.6
Samples: 4

Max nTPM: 48.7
Min nTPM: 36.4
Sample A Female 48.0
Sample B Female 45.2
Sample C Male 48.7
Sample D Male 36.4
Entorhinal cortex
nTPM: 42.2
Samples: 4

Max nTPM: 44.6
Min nTPM: 40.4
Sample A Female 42.7
Sample B Female 40.4
Sample C Male 44.6
Sample D Male 41.1
Ventral hippocampus
nTPM: 44.6
Samples: 4

Max nTPM: 50.4
Min nTPM: 35.5
Sample A Female 50.4
Sample B Female 35.5
Sample C Male 47.7
Sample D Male 44.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.4
Samples: 4

Max nTPM: 22.9
Min nTPM: 16.2
Sample A Male 16.2
Sample B Male 17.0
Sample C Female 17.4
Sample D Female 22.9
Hippocampal formation
nTPM: 18.3
Samples: 4

Max nTPM: 20.8
Min nTPM: 16.0
Sample A Male 17.0
Sample B Male 19.3
Sample C Female 20.8
Sample D Female 16.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.6
69735855 Antisense, RP_050503_03_F09, Mouse strain C57BL/6J (56 days, male) 15.6

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