HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:31.7 nTPM
HPA Brain:32.5 nTPM
GTEx:31.7 nTPM
FANTOM5:29.0 Scaled Tags Per Million
Pig:3.1 nTPM
Mouse:5.1 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035467Antibody CAB034924
Glial cells Not detectedMedium
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.5
Sample id Sample description nTPM
Hippocampus
nTPM: 30.3
2529 Female, age 94, left hemisphere 34.4
1911 Female, age 85, right hemisphere 32.4
2148 Female, age 91, left hemisphere 31.1
2621 Female, age 67, right hemisphere 30.5
1898 Male, age 80, left hemisphere 29.1
1855 Male, age 76, left hemisphere 24.4
Dentate gyrus
nTPM: 29.7
2530 Female, age 94, left hemisphere 38.4
2531 Female, age 67, both hemispheres 29.8
1927 Female, age 91, both hemispheres 29.5
2010 Male, age 76, both hemispheres 28.0
2528 Male, age 74, both hemispheres 27.5
2246 Female, age 85, both hemispheres 25.3
Entorhinal gyrus
nTPM: 32.5
2764 Male, age 80, right hemisphere 35.6
2686 Male, age 75, right hemisphere 35.0
2117 Female, age 91, right hemisphere 33.1
2613 Female, age 94, left hemisphere 32.4
1787 Male, age 76, left hemisphere 30.9
1938 Female, age 85, left hemisphere 28.0
Hippocampus, CA1
nTPM: 28.3
2082 Female, age 91, right hemisphere 31.7
1873 Female, age 85, both hemispheres 29.8
2749 Male, age 80, left hemisphere 27.4
2527 Male, age 74, both hemispheres 27.0
2045 Male, age 76, both hemispheres 25.4
Hippocampus, CA2
nTPM: 30.2
1963 Male, age 80, left hemisphere 37.9
2437 Female, age 94, left hemisphere 30.7
1940 Female, age 85, left hemisphere 29.0
2113 Female, age 91, right hemisphere 28.3
2249 Male, age 74, both hemispheres 27.6
1892 Male, age 76, both hemispheres 27.5
Hippocampus, CA3
nTPM: 29.6
2620 Female, age 94, left hemisphere 34.2
1867 Male, age 76, both hemispheres 31.7
1891 Female, age 85, both hemispheres 31.7
2861 Female, age 67, both hemispheres 31.4
2137 Male, age 80, left hemisphere 27.1
2436 Male, age 74, both hemispheres 21.5
Parahippocampal cortex
nTPM: 26.9
1990 Female, age 91, right hemisphere 31.8
2018 Male, age 76, both hemispheres 30.8
2692 Male, age 74, both hemispheres 28.9
1933 Female, age 85, both hemispheres 28.8
1850 Male, age 80, both hemispheres 26.0
2245 Female, age 91, both hemispheres 25.9
2532 Female, age 72, left hemisphere 25.7
2622 Female, age 67, right hemisphere 25.5
2693 Female, age 94, both hemispheres 23.2
2250 Female, age 67, right hemisphere 22.7
Perirhinal gyrus
nTPM: 26.5
1847 Female, age 91, left hemisphere 27.7
2521 Female, age 94, right hemisphere 27.3
1794 Male, age 80, right hemisphere 27.1
2848 Male, age 76, right hemisphere 25.6
1841 Female, age 85, right hemisphere 24.7
Subiculum
nTPM: 29.4
2042 Male, age 76, both hemispheres 33.3
1901 Male, age 80, both hemispheres 32.4
1977 Female, age 85, both hemispheres 30.9
2729 Female, age 91, right hemisphere 30.4
2619 Male, age 74, both hemispheres 26.6
2438 Female, age 94, left hemisphere 22.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.7
Samples: 197

Max nTPM: 59.9
Min nTPM: 13.7
Std nTPM: 8.0
Median nTPM: 31.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 59.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 55.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 54.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 53.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 52.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 52.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 51.7
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 49.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 48.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 48.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 46.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.0
FF:10153-102I9 76 years, female 38.3
FF:10169-103B7 60 years, female 19.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.1
Pig sample Sample description nTPM
Subiculum
nTPM: 1.7
Samples: 4

Max nTPM: 6.5
Min nTPM: 0.0
Sample A Female 6.5
Sample B Female 0.0
Sample C Male 0.4
Sample D Male 0.0
Dorsal hippocampus
nTPM: 3.2
Samples: 4

Max nTPM: 8.2
Min nTPM: 0.0
Sample A Female 8.2
Sample B Female 0.0
Sample C Male 4.4
Sample D Male 0.0
Entorhinal cortex
nTPM: 1.5
Samples: 4

Max nTPM: 4.9
Min nTPM: 0.0
Sample A Female 1.1
Sample B Female 0.0
Sample C Male 4.9
Sample D Male 0.0
Ventral hippocampus
nTPM: 2.7
Samples: 4

Max nTPM: 8.1
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 8.1
Sample D Male 2.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.1
Samples: 4

Max nTPM: 6.3
Min nTPM: 3.6
Sample A Male 5.0
Sample B Male 5.6
Sample C Female 6.3
Sample D Female 3.6
Hippocampal formation
nTPM: 4.4
Samples: 4

Max nTPM: 5.2
Min nTPM: 3.1
Sample A Male 3.1
Sample B Male 4.2
Sample C Female 5.1
Sample D Female 5.2

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