HIPPOCAMPAL FORMATION - Expression summary
Mouse brain, Intensity
Hippocampal formationi 		59.594
Protein expressioni No data
RNA expressioni
Consensus:21.0 nTPM
HPA Brain:62.5 nTPM
GTEx:21.0 nTPM
FANTOM5:96.8 Scaled Tags Per Million
Pig:65.8 nTPM
Mouse:60.5 nTPM
Allen mouse:4.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA077376
Hippocampal formation mean intensity 59.594
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 59.594
Molecular layer of the dentate gyrus 46.858
Granular dentate gyrus 59.139
CA1 - oriens layer 43.438
CA1 - pyramidal layer 53.600
CA1 - radiatum layer 45.822
CA2 - oriens layer 45.264
CA2 - pyramidal layer 57.555
CA2 - radiatum layer 48.586
CA3 - oriens layer 45.102
CA3 - pyramidal layer 51.412
CA3 - radiatum layer 45.911
Stratum lucidum 45.927
Lacunosum moleculare 40.898
Subiculum 44.245

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.5
Sample id Sample description nTPM
Hippocampus
nTPM: 62.5
1855 Male, age 76, left hemisphere 94.4
1898 Male, age 80, left hemisphere 68.6
2621 Female, age 67, right hemisphere 61.5
2148 Female, age 91, left hemisphere 54.9
1911 Female, age 85, right hemisphere 53.2
2529 Female, age 94, left hemisphere 42.5
Dentate gyrus
nTPM: 61.9
2010 Male, age 76, both hemispheres 86.9
1927 Female, age 91, both hemispheres 69.0
2530 Female, age 94, left hemisphere 62.9
2531 Female, age 67, both hemispheres 56.4
2246 Female, age 85, both hemispheres 52.6
2528 Male, age 74, both hemispheres 43.5
Entorhinal gyrus
nTPM: 35.5
2117 Female, age 91, right hemisphere 44.1
1787 Male, age 76, left hemisphere 43.3
1938 Female, age 85, left hemisphere 37.4
2613 Female, age 94, left hemisphere 30.3
2764 Male, age 80, right hemisphere 29.9
2686 Male, age 75, right hemisphere 28.2
Hippocampus, CA1
nTPM: 61.7
2045 Male, age 76, both hemispheres 103.3
1873 Female, age 85, both hemispheres 82.4
2749 Male, age 80, left hemisphere 55.5
2082 Female, age 91, right hemisphere 34.3
2527 Male, age 74, both hemispheres 33.0
Hippocampus, CA2
nTPM: 49.6
1892 Male, age 76, both hemispheres 69.1
1963 Male, age 80, left hemisphere 62.1
1940 Female, age 85, left hemisphere 49.0
2437 Female, age 94, left hemisphere 49.0
2113 Female, age 91, right hemisphere 39.2
2249 Male, age 74, both hemispheres 29.0
Hippocampus, CA3
nTPM: 46.5
2861 Female, age 67, both hemispheres 64.4
1867 Male, age 76, both hemispheres 61.5
1891 Female, age 85, both hemispheres 47.2
2620 Female, age 94, left hemisphere 44.9
2137 Male, age 80, left hemisphere 34.5
2436 Male, age 74, both hemispheres 26.3
Parahippocampal cortex
nTPM: 34.7
2250 Female, age 67, right hemisphere 58.4
2018 Male, age 76, both hemispheres 45.8
2245 Female, age 91, both hemispheres 39.5
2693 Female, age 94, both hemispheres 37.5
1933 Female, age 85, both hemispheres 34.8
1990 Female, age 91, right hemisphere 31.5
1850 Male, age 80, both hemispheres 31.1
2532 Female, age 72, left hemisphere 24.6
2622 Female, age 67, right hemisphere 22.3
2692 Male, age 74, both hemispheres 21.7
Perirhinal gyrus
nTPM: 38.1
2521 Female, age 94, right hemisphere 44.5
2848 Male, age 76, right hemisphere 41.4
1841 Female, age 85, right hemisphere 37.8
1847 Female, age 91, left hemisphere 36.8
1794 Male, age 80, right hemisphere 29.9
Subiculum
nTPM: 40.4
2729 Female, age 91, right hemisphere 55.5
2042 Male, age 76, both hemispheres 47.9
2438 Female, age 94, left hemisphere 39.9
1977 Female, age 85, both hemispheres 37.1
1901 Male, age 80, both hemispheres 33.6
2619 Male, age 74, both hemispheres 28.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.0
Samples: 197

Max nTPM: 61.7
Min nTPM: 6.2
Std nTPM: 10.0
Median nTPM: 18.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 61.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 61.7
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 55.2
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 50.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 49.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 45.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 43.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 43.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 42.2
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 42.1
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 40.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 96.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 96.8
FF:10153-102I9 76 years, female 101.3
FF:10169-103B7 60 years, female 92.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 65.8
Pig sample Sample description nTPM
Subiculum
nTPM: 38.3
Samples: 4

Max nTPM: 48.2
Min nTPM: 28.7
Sample A Female 48.2
Sample B Female 38.2
Sample C Male 38.2
Sample D Male 28.7
Dorsal hippocampus
nTPM: 65.8
Samples: 4

Max nTPM: 81.8
Min nTPM: 46.3
Sample A Female 81.8
Sample B Female 72.4
Sample C Male 46.3
Sample D Male 62.8
Entorhinal cortex
nTPM: 23.0
Samples: 4

Max nTPM: 25.6
Min nTPM: 17.3
Sample A Female 24.6
Sample B Female 24.6
Sample C Male 25.6
Sample D Male 17.3
Ventral hippocampus
nTPM: 62.9
Samples: 4

Max nTPM: 72.2
Min nTPM: 54.1
Sample A Female 72.2
Sample B Female 54.1
Sample C Male 65.2
Sample D Male 60.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.1
Samples: 4

Max nTPM: 45.5
Min nTPM: 26.8
Sample A Male 32.2
Sample B Male 26.8
Sample C Female 45.5
Sample D Female 43.9
Hippocampal formation
nTPM: 60.5
Samples: 4

Max nTPM: 70.1
Min nTPM: 51.6
Sample A Male 51.6
Sample B Male 68.5
Sample C Female 70.1
Sample D Female 51.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.8
69735729 Antisense, RP_050503_03_D08, Mouse strain C57BL/6J (56 days, male) 6.2
73520993 Antisense, RP_051101_02_G12, Mouse strain C57BL/6J (56 days, male) 3.4

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