HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:208.1 nTPM
HPA Brain:249.3 nTPM
GTEx:208.1 nTPM
FANTOM5:626.6 Scaled Tags Per Million
Pig:274.7 nTPM
Mouse:369.1 nTPM
Allen mouse:14.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036980Antibody HPA036981
Glial cells Not detectedNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 249.3
Sample id Sample description nTPM
Hippocampus
nTPM: 237.1
1898 Male, age 80, left hemisphere 263.1
2621 Female, age 67, right hemisphere 255.3
1855 Male, age 76, left hemisphere 236.6
2148 Female, age 91, left hemisphere 232.3
2529 Female, age 94, left hemisphere 228.0
1911 Female, age 85, right hemisphere 207.3
Dentate gyrus
nTPM: 223.2
2530 Female, age 94, left hemisphere 259.7
1927 Female, age 91, both hemispheres 241.3
2246 Female, age 85, both hemispheres 219.5
2528 Male, age 74, both hemispheres 219.0
2010 Male, age 76, both hemispheres 213.2
2531 Female, age 67, both hemispheres 186.1
Entorhinal gyrus
nTPM: 214.5
2764 Male, age 80, right hemisphere 232.1
2613 Female, age 94, left hemisphere 229.1
1938 Female, age 85, left hemisphere 218.0
2117 Female, age 91, right hemisphere 211.9
1787 Male, age 76, left hemisphere 207.6
2686 Male, age 75, right hemisphere 188.3
Hippocampus, CA1
nTPM: 249.3
2749 Male, age 80, left hemisphere 381.0
1873 Female, age 85, both hemispheres 256.9
2527 Male, age 74, both hemispheres 232.4
2045 Male, age 76, both hemispheres 198.4
2082 Female, age 91, right hemisphere 177.8
Hippocampus, CA2
nTPM: 210.7
1892 Male, age 76, both hemispheres 246.3
1963 Male, age 80, left hemisphere 236.8
2113 Female, age 91, right hemisphere 204.0
2437 Female, age 94, left hemisphere 195.0
2249 Male, age 74, both hemispheres 192.9
1940 Female, age 85, left hemisphere 189.0
Hippocampus, CA3
nTPM: 244.9
2137 Male, age 80, left hemisphere 340.6
2620 Female, age 94, left hemisphere 271.7
2861 Female, age 67, both hemispheres 244.8
1867 Male, age 76, both hemispheres 225.6
1891 Female, age 85, both hemispheres 193.8
2436 Male, age 74, both hemispheres 192.8
Parahippocampal cortex
nTPM: 206.0
2245 Female, age 91, both hemispheres 261.2
1850 Male, age 80, both hemispheres 223.4
1933 Female, age 85, both hemispheres 207.2
2622 Female, age 67, right hemisphere 206.7
2532 Female, age 72, left hemisphere 201.5
1990 Female, age 91, right hemisphere 201.3
2692 Male, age 74, both hemispheres 196.6
2693 Female, age 94, both hemispheres 192.7
2250 Female, age 67, right hemisphere 192.6
2018 Male, age 76, both hemispheres 176.8
Perirhinal gyrus
nTPM: 218.7
1794 Male, age 80, right hemisphere 258.4
1847 Female, age 91, left hemisphere 240.9
1841 Female, age 85, right hemisphere 221.3
2521 Female, age 94, right hemisphere 194.6
2848 Male, age 76, right hemisphere 178.0
Subiculum
nTPM: 210.1
1901 Male, age 80, both hemispheres 236.4
2619 Male, age 74, both hemispheres 235.1
2438 Female, age 94, left hemisphere 214.0
2042 Male, age 76, both hemispheres 195.9
1977 Female, age 85, both hemispheres 194.2
2729 Female, age 91, right hemisphere 185.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 208.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 208.1
Samples: 197

Max nTPM: 397.4
Min nTPM: 72.0
Std nTPM: 63.4
Median nTPM: 200.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 397.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 371.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 363.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 361.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 354.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 352.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 347.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 346.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 328.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 327.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 325.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 626.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 626.6
FF:10169-103B7 60 years, female 871.3
FF:10153-102I9 76 years, female 381.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 274.7
Pig sample Sample description nTPM
Subiculum
nTPM: 200.3
Samples: 4

Max nTPM: 258.2
Min nTPM: 167.4
Sample A Female 258.2
Sample B Female 169.0
Sample C Male 206.7
Sample D Male 167.4
Dorsal hippocampus
nTPM: 274.7
Samples: 4

Max nTPM: 371.8
Min nTPM: 211.2
Sample A Female 371.8
Sample B Female 299.3
Sample C Male 216.5
Sample D Male 211.2
Entorhinal cortex
nTPM: 190.0
Samples: 4

Max nTPM: 224.7
Min nTPM: 157.3
Sample A Female 224.7
Sample B Female 157.3
Sample C Male 202.1
Sample D Male 175.8
Ventral hippocampus
nTPM: 245.1
Samples: 4

Max nTPM: 337.3
Min nTPM: 141.9
Sample A Female 225.1
Sample B Female 141.9
Sample C Male 276.0
Sample D Male 337.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 369.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 279.1
Samples: 4

Max nTPM: 322.8
Min nTPM: 248.5
Sample A Male 264.7
Sample B Male 248.5
Sample C Female 280.2
Sample D Female 322.8
Hippocampal formation
nTPM: 369.2
Samples: 4

Max nTPM: 418.5
Min nTPM: 316.7
Sample A Male 316.7
Sample B Male 384.8
Sample C Female 418.5
Sample D Female 356.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.0
68162255 Antisense, RP_041122_02_E12, Mouse strain C57BL/6J (56 days, male) 26.2
1948 Antisense, RP_040507_01_F08, Mouse strain C57BL/6J (56 days, male) 1.8

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