HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:6.7 nTPM
HPA Brain:11.9 nTPM
GTEx:6.7 nTPM
FANTOM5:0.6 Scaled Tags Per Million
Pig:17.4 nTPM
Mouse:1.6 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.9
Sample id Sample description nTPM
Hippocampus
nTPM: 10.5
1855 Male, age 76, left hemisphere 17.2
1898 Male, age 80, left hemisphere 14.2
2621 Female, age 67, right hemisphere 10.4
2148 Female, age 91, left hemisphere 9.7
1911 Female, age 85, right hemisphere 7.4
2529 Female, age 94, left hemisphere 4.4
Dentate gyrus
nTPM: 9.7
2010 Male, age 76, both hemispheres 14.9
1927 Female, age 91, both hemispheres 11.9
2246 Female, age 85, both hemispheres 9.3
2530 Female, age 94, left hemisphere 8.9
2531 Female, age 67, both hemispheres 7.7
2528 Male, age 74, both hemispheres 5.6
Entorhinal gyrus
nTPM: 7.3
2764 Male, age 80, right hemisphere 10.1
2613 Female, age 94, left hemisphere 9.5
1938 Female, age 85, left hemisphere 7.8
2686 Male, age 75, right hemisphere 6.0
1787 Male, age 76, left hemisphere 5.3
2117 Female, age 91, right hemisphere 5.0
Hippocampus, CA1
nTPM: 11.9
2749 Male, age 80, left hemisphere 23.1
1873 Female, age 85, both hemispheres 14.3
2045 Male, age 76, both hemispheres 10.9
2527 Male, age 74, both hemispheres 7.4
2082 Female, age 91, right hemisphere 3.9
Hippocampus, CA2
nTPM: 8.3
1963 Male, age 80, left hemisphere 15.6
1892 Male, age 76, both hemispheres 12.4
2437 Female, age 94, left hemisphere 7.0
2249 Male, age 74, both hemispheres 6.9
2113 Female, age 91, right hemisphere 4.4
1940 Female, age 85, left hemisphere 3.3
Hippocampus, CA3
nTPM: 9.8
2137 Male, age 80, left hemisphere 15.1
2861 Female, age 67, both hemispheres 12.4
1867 Male, age 76, both hemispheres 12.1
2620 Female, age 94, left hemisphere 8.0
1891 Female, age 85, both hemispheres 6.0
2436 Male, age 74, both hemispheres 5.0
Parahippocampal cortex
nTPM: 6.6
2532 Female, age 72, left hemisphere 11.5
2018 Male, age 76, both hemispheres 8.5
2245 Female, age 91, both hemispheres 7.3
1850 Male, age 80, both hemispheres 6.9
1990 Female, age 91, right hemisphere 6.7
2622 Female, age 67, right hemisphere 6.4
1933 Female, age 85, both hemispheres 6.0
2693 Female, age 94, both hemispheres 5.5
2692 Male, age 74, both hemispheres 4.9
2250 Female, age 67, right hemisphere 2.2
Perirhinal gyrus
nTPM: 5.6
2848 Male, age 76, right hemisphere 8.9
1794 Male, age 80, right hemisphere 6.8
1841 Female, age 85, right hemisphere 4.9
1847 Female, age 91, left hemisphere 4.8
2521 Female, age 94, right hemisphere 2.3
Subiculum
nTPM: 6.3
1901 Male, age 80, both hemispheres 8.7
2042 Male, age 76, both hemispheres 7.8
1977 Female, age 85, both hemispheres 7.0
2438 Female, age 94, left hemisphere 5.7
2729 Female, age 91, right hemisphere 5.6
2619 Male, age 74, both hemispheres 3.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.7
Samples: 197

Max nTPM: 43.4
Min nTPM: 0.4
Std nTPM: 5.4
Median nTPM: 5.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 43.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 27.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 24.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 22.8
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 20.3
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 18.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 18.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 18.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 16.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 16.0
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 15.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 0.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.6
FF:10153-102I9 76 years, female 1.3
FF:10169-103B7 60 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.4
Pig sample Sample description nTPM
Subiculum
nTPM: 0.7
Samples: 4

Max nTPM: 1.8
Min nTPM: 0.3
Sample A Female 0.4
Sample B Female 0.3
Sample C Male 0.4
Sample D Male 1.8
Dorsal hippocampus
nTPM: 0.2
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.0
Sample A Female 0.4
Sample B Female 0.3
Sample C Male 0.2
Sample D Male 0.0
Entorhinal cortex
nTPM: 17.5
Samples: 4

Max nTPM: 26.3
Min nTPM: 12.8
Sample A Female 26.3
Sample B Female 17.4
Sample C Male 12.8
Sample D Male 13.3
Ventral hippocampus
nTPM: 0.3
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.0
Sample A Female 0.3
Sample B Female 0.6
Sample C Male 0.4
Sample D Male 0.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.3
Samples: 4

Max nTPM: 1.8
Min nTPM: 1.0
Sample A Male 1.0
Sample B Male 1.8
Sample C Female 1.0
Sample D Female 1.5
Hippocampal formation
nTPM: 1.6
Samples: 4

Max nTPM: 2.0
Min nTPM: 0.8
Sample A Male 1.9
Sample B Male 1.5
Sample C Female 0.8
Sample D Female 2.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
69289411 Antisense, RP_050407_03_B07, Mouse strain C57BL/6J (56 days, male) 0.4

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