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RFLNA
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  • RFLNA
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

RFLNA
Synonyms Cfm2, FAM101A, FLJ44614, RefilinA
Gene descriptioni

Full gene name according to HGNC.

Refilin A
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 12
Cytoband q24.31
Chromosome location (bp) 123973241 - 124316024
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000178882 (version 109)
Entrez gene 144347
HGNC HGNC:27051
UniProt Q6ZTI6 (UniProt - Evidence at protein level)
neXtProt NX_Q6ZTI6
GeneCards RFLNA
Antibodypedia RFLNA antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Involved in the regulation of the perinuclear actin network and nuclear shape through interaction with filamins. Plays an essential role in actin cytoskeleton formation in developing cartilaginous cells.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable filamin binding activity. Predicted to be involved in several processes, including actin filament bundle organization; negative regulation of bone mineralization involved in bone maturation; and negative regulation of chondrocyte development. Predicted to be located in cytoplasm. Predicted to be active in actin filament bundle. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
RFLNA-201
ENSP00000315626
ENST00000324038
Q6ZTI6
[Direct mapping] Refilin-A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0031005 [filamin binding]
GO:0032432 [actin filament bundle]
GO:0048705 [skeletal system morphogenesis]
GO:0061181 [regulation of chondrocyte development]
GO:0061182 [negative regulation of chondrocyte development]
GO:0061572 [actin filament bundle organization]
GO:1900158 [negative regulation of bone mineralization involved in bone maturation]
Show all
135 aa
15.5 kDa
No 0
RFLNA-202
ENSP00000345898
ENST00000338359
Q6ZTI6
[Direct mapping] Refilin-A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0031005 [filamin binding]
GO:0032432 [actin filament bundle]
GO:0048705 [skeletal system morphogenesis]
GO:0061181 [regulation of chondrocyte development]
GO:0061182 [negative regulation of chondrocyte development]
GO:0061572 [actin filament bundle organization]
GO:1900158 [negative regulation of bone mineralization involved in bone maturation]
Show all
135 aa
15.5 kDa
No 0
RFLNA-203
ENSP00000374377
ENST00000389727
Q6ZTI6
[Direct mapping] Refilin-A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0031005 [filamin binding]
GO:0032432 [actin filament bundle]
GO:0048705 [skeletal system morphogenesis]
GO:0061181 [regulation of chondrocyte development]
GO:0061182 [negative regulation of chondrocyte development]
GO:0061572 [actin filament bundle organization]
GO:1900158 [negative regulation of bone mineralization involved in bone maturation]
Show all
135 aa
15.5 kDa
No 0
RFLNA-205
ENSP00000444080
ENST00000546355
Q6ZTI6
[Direct mapping] Refilin-A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0031005 [filamin binding]
GO:0032432 [actin filament bundle]
GO:0048705 [skeletal system morphogenesis]
GO:0061181 [regulation of chondrocyte development]
GO:0061182 [negative regulation of chondrocyte development]
GO:0061572 [actin filament bundle organization]
GO:1900158 [negative regulation of bone mineralization involved in bone maturation]
Show all
216 aa
23.6 kDa
No 0

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