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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
36.0
nTPM
Monaco:
19.1
nTPM
Schmiedel:
21.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
36.0
HPA sample
nTPM
gdT-cell nTPM: 34.9
Samples: 6
Max nTPM: 50.1
Min nTPM: 24.1
P10809_1007
24.4
P10809_1022
37.9
P10809_1041
24.1
P10809_1060
31.9
P10809_1077
40.7
P10809_1098
50.1
MAIT T-cell nTPM: 36.1
Samples: 6
Max nTPM: 47.7
Min nTPM: 22.6
P10809_1006
22.6
P10809_1024
40.7
P10809_1043
47.7
P10809_1062
39.1
P10809_1083
36.4
P10809_1097
29.9
Memory CD4 T-cell nTPM: 27.5
Samples: 6
Max nTPM: 34.5
Min nTPM: 19.8
P10809_1014
19.8
P10809_1026
34.5
P10809_1045
29.9
P10809_1064
25.5
P10809_1086
26.0
P10809_1113
29.3
Memory CD8 T-cell nTPM: 34.7
Samples: 5
Max nTPM: 49.0
Min nTPM: 21.8
P10809_1012
21.8
P10809_1027
49.0
P10809_1046
38.3
P10809_1065
37.1
P10809_1111
27.5
Naive CD4 T-cell nTPM: 33.5
Samples: 6
Max nTPM: 52.0
Min nTPM: 19.5
P10809_1015
19.5
P10809_1030
35.8
P10809_1049
52.0
P10809_1068
34.7
P10809_1085
23.8
P10809_1112
35.1
Naive CD8 T-cell nTPM: 32.7
Samples: 6
Max nTPM: 45.1
Min nTPM: 22.3
P10809_1016
22.3
P10809_1031
45.1
P10809_1050
36.4
P10809_1069
24.9
P10809_1087
30.4
P10809_1110
36.8
T-reg nTPM: 34.2
Samples: 6
Max nTPM: 46.5
Min nTPM: 21.0
P10809_1018
21.0
P10809_1037
46.5
P10809_1056
34.8
P10809_1075
33.7
P10809_1094
29.4
P10809_1106
39.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 6.9
Samples: 4
Max nTPM: 10.7
Min nTPM: 3.2
RHH5202_R3573
3.2
RHH5230_R3602
4.7
RHH5259_R3631
9.1
RHH5288_R3660
10.7
Effector memory CD8 T-cell nTPM: 9.2
Samples: 4
Max nTPM: 11.4
Min nTPM: 7.5
RHH5203_R3574
11.4
RHH5231_R3603
9.1
RHH5260_R3632
7.5
RHH5289_R3661
8.7
MAIT T-cell nTPM: 11.3
Samples: 4
Max nTPM: 18.8
Min nTPM: 5.5
RHH5233_R3605
8.8
RHH5205_R3576
5.5
RHH5262_R3634
11.9
RHH5297_R3663
18.8
Memory CD4 T-cell TFH nTPM: 11.8
Samples: 4
Max nTPM: 15.9
Min nTPM: 6.4
RHH5300_R3666
13.3
RHH5236_R3608
15.9
RHH5265_R3637
11.4
RHH5208_R3579
6.4
Memory CD4 T-cell Th1 nTPM: 11.7
Samples: 4
Max nTPM: 20.0
Min nTPM: 4.1
RHH5210_R3581
4.1
RHH5302_R3668
20.0
RHH5238_R3610
11.7
RHH5267_R3639
11.0
Memory CD4 T-cell Th1/Th17 nTPM: 8.5
Samples: 4
Max nTPM: 19.0
Min nTPM: 1.9
RHH5303_R3669
19.0
RHH5211_R3582
7.3
RHH5239_R3611
1.9
RHH5268_R3640
5.9
Memory CD4 T-cell Th17 nTPM: 4.9
Samples: 4
Max nTPM: 5.5
Min nTPM: 4.2
RHH5304_R3670
5.5
RHH5212_R3583
5.3
RHH5240_R3612
4.4
RHH5269_R3641
4.2
Memory CD4 T-cell Th2 nTPM: 8.2
Samples: 4
Max nTPM: 13.9
Min nTPM: 3.8
RHH5305_R3671
13.9
RHH5213_R3584
3.8
RHH5241_R3613
7.8
RHH5270_R3642
7.2
Naive CD4 T-cell nTPM: 18.2
Samples: 4
Max nTPM: 28.1
Min nTPM: 10.7
RHH5306_R3672
10.7
RHH5214_R3585
28.1
RHH5242_R3614
17.5
RHH5271_R3643
16.3
Naive CD8 T-cell nTPM: 8.9
Samples: 4
Max nTPM: 12.3
Min nTPM: 4.3
RHH5201_R3572
9.7
RHH5229_R3601
4.3
RHH5258_R3630
12.3
RHH5287_R3659
9.4
Non-Vd2 gdTCR nTPM: 19.1
Samples: 4
Max nTPM: 27.8
Min nTPM: 8.7
RHH5235_R3607
8.7
RHH5264_R3636
26.0
RHH5207_R3578
13.8
RHH5299_R3665
27.8
T-reg nTPM: 11.9
Samples: 4
Max nTPM: 19.2
Min nTPM: 6.6
RHH5301_R3667
19.2
RHH5237_R3609
6.6
RHH5266_R3638
13.2
RHH5209_R3580
8.5
Terminal effector memory CD4 T-cell nTPM: 9.2
Samples: 2
Max nTPM: 15.3
Min nTPM: 3.1
RHH5243_R3615
3.1
RHH5272_R3644
15.3
Terminal effector memory CD8 T-cell nTPM: 17.8
Samples: 4
Max nTPM: 38.6
Min nTPM: 7.2
RHH5232_R3604
7.2
RHH5204_R3575
38.6
RHH5261_R3633
16.5
RHH5296_R3662
8.7
Vd2 gdTCR nTPM: 12.6
Samples: 4
Max nTPM: 15.1
Min nTPM: 7.5
RHH5234_R3606
7.5
RHH5206_R3577
15.1
RHH5263_R3635
12.7
RHH5298_R3664
15.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
