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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
93.4
nTPM
GTEx:
93.4
nTPM
FANTOM5:
52.3
Scaled Tags Per Million
Pig:
18.9
nTPM
Mouse:
16.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
93.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 93.4
Samples: 105
Max nTPM: 152.7
Min nTPM: 54.8
Std nTPM: 17.8
Median nTPM: 0.0
99_1
64 years, male
152.7
308_1
70 years, female
148.9
491_1
89 years, female
142.0
384_1
83 years, male
128.5
42_1
85 years, male
127.5
490_1
67 years, female
125.2
495_1
57 years, female
122.7
347_1
72 years, male
121.1
119_1
70 years, female
120.5
89_1
63 years, male
117.9
35_1
74 years, female
117.2
246_1
77 years, male
115.9
413_1
59 years, female
115.3
315_1
62 years, female
113.0
415_1
77 years, female
111.8
41_1
94 years, female
110.7
375_1
74 years, female
110.4
307_1
66 years, female
110.3
162_1
79 years, female
109.9
237_1
82 years, male
109.6
414_1
84 years, female
109.2
379_1
60 years, male
107.8
447_1
81 years, male
107.8
32_1
67 years, male
107.6
317_1
60 years, male
107.4
173_1
67 years, male
106.5
466_1
57 years, female
105.3
265_1
87 years, male
104.4
254_1
77 years, female
103.9
120_1
70 years, female
102.6
355_1
70 years, female
101.0
149_1
88 years, male
100.4
218_1
71 years, female
98.2
266_1
85 years, male
96.7
9_1
66 years, female
96.2
501_1
88 years, male
95.0
396_1
62 years, male
94.3
314_1
67 years, male
94.1
117_1
61 years, male
93.3
139_1
64 years, female
93.3
17_1
71 years, male
93.2
43_1
64 years, female
93.0
389_1
86 years, female
92.9
115_1
83 years, male
92.7
109_1
81 years, female
91.9
177_1
74 years, male
91.8
153_1
70 years, female
91.7
311_1
78 years, male
91.6
81_1
67 years, male
91.5
313_1
79 years, female
91.5
386_1
76 years, male
91.4
189_1
76 years, male
91.3
356_1
87 years, female
90.6
2_1
77 years, female
90.3
142_1
61 years, female
89.7
229_1
69 years, female
89.7
126_1
63 years, male
88.9
291_1
76 years, male
88.9
145_1
84 years, male
88.6
324_1
76 years, male
88.5
137_1
83 years, male
88.3
452_1
88 years, female
87.7
264_1
73 years, female
87.5
288_1
66 years, female
87.3
18_1
88 years, male
86.9
404_1
82 years, female
86.6
394_1
75 years, female
86.5
468_1
89 years, male
86.1
321_1
62 years, female
85.3
499_1
55 years, female
85.0
217_1
76 years, male
84.7
377_1
82 years, female
84.4
4_1
88 years, female
84.2
295_1
61 years, female
84.2
353_1
82 years, female
84.2
172_1
72 years, female
83.9
351_1
91 years, male
81.9
354_1
81 years, female
81.3
243_1
75 years, male
81.1
348_1
84 years, male
81.0
526_1
61 years, male
81.0
350_1
84 years, female
80.1
319_1
81 years, male
79.5
6_1
73 years, female
78.9
405_1
91 years, male
78.7
251_1
78 years, male
78.6
376_1
75 years, female
78.3
349_1
83 years, male
77.9
518_1
75 years, female
77.1
506_1
65 years, male
76.7
352_1
62 years, male
75.7
292_1
71 years, male
74.6
425_1
59 years, female
74.6
293_1
68 years, female
73.9
406_1
79 years, male
73.5
517_1
88 years, male
73.1
503_1
68 years, male
71.7
480_1
63 years, male
70.3
286_1
68 years, female
69.7
318_1
68 years, male
69.7
335_1
73 years, female
67.5
163_1
78 years, male
67.4
322_1
76 years, male
67.3
320_1
89 years, female
64.6
316_1
62 years, male
54.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
