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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
85.8
nTPM
Monaco:
384.9
nTPM
Schmiedel:
431.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
85.8
HPA sample
nTPM
gdT-cell nTPM: 54.3
Samples: 6
Max nTPM: 58.5
Min nTPM: 49.1
P10809_1007
58.5
P10809_1022
56.6
P10809_1041
53.5
P10809_1060
52.9
P10809_1077
54.9
P10809_1098
49.1
MAIT T-cell nTPM: 70.4
Samples: 6
Max nTPM: 74.0
Min nTPM: 65.1
P10809_1006
74.0
P10809_1024
69.0
P10809_1043
70.2
P10809_1062
72.2
P10809_1083
72.0
P10809_1097
65.1
Memory CD4 T-cell nTPM: 63.9
Samples: 6
Max nTPM: 74.0
Min nTPM: 48.1
P10809_1014
74.0
P10809_1026
72.1
P10809_1045
67.4
P10809_1064
48.1
P10809_1086
62.4
P10809_1113
59.3
Memory CD8 T-cell nTPM: 62.0
Samples: 5
Max nTPM: 74.8
Min nTPM: 49.4
P10809_1012
74.8
P10809_1027
70.7
P10809_1046
60.5
P10809_1065
49.4
P10809_1111
54.4
Naive CD4 T-cell nTPM: 85.8
Samples: 6
Max nTPM: 108.1
Min nTPM: 64.9
P10809_1015
108.1
P10809_1030
80.2
P10809_1049
93.8
P10809_1068
92.2
P10809_1085
64.9
P10809_1112
75.8
Naive CD8 T-cell nTPM: 74.7
Samples: 6
Max nTPM: 94.8
Min nTPM: 52.1
P10809_1016
94.8
P10809_1031
93.4
P10809_1050
74.7
P10809_1069
65.7
P10809_1087
52.1
P10809_1110
67.4
T-reg nTPM: 59.4
Samples: 6
Max nTPM: 78.1
Min nTPM: 25.2
P10809_1018
70.9
P10809_1037
43.6
P10809_1056
72.9
P10809_1075
25.2
P10809_1094
78.1
P10809_1106
65.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
384.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 263.4
Samples: 4
Max nTPM: 287.8
Min nTPM: 240.8
RHH5202_R3573
287.8
RHH5230_R3602
278.7
RHH5259_R3631
246.3
RHH5288_R3660
240.8
Effector memory CD8 T-cell nTPM: 325.8
Samples: 4
Max nTPM: 331.1
Min nTPM: 317.2
RHH5203_R3574
317.2
RHH5231_R3603
330.4
RHH5260_R3632
324.6
RHH5289_R3661
331.1
MAIT T-cell nTPM: 370.9
Samples: 4
Max nTPM: 421.0
Min nTPM: 325.7
RHH5233_R3605
325.7
RHH5205_R3576
421.0
RHH5262_R3634
380.2
RHH5297_R3663
356.7
Memory CD4 T-cell TFH nTPM: 261.9
Samples: 4
Max nTPM: 307.7
Min nTPM: 216.5
RHH5300_R3666
221.0
RHH5236_R3608
307.7
RHH5265_R3637
216.5
RHH5208_R3579
302.5
Memory CD4 T-cell Th1 nTPM: 267.3
Samples: 4
Max nTPM: 285.2
Min nTPM: 258.4
RHH5210_R3581
267.0
RHH5302_R3668
285.2
RHH5238_R3610
258.6
RHH5267_R3639
258.4
Memory CD4 T-cell Th1/Th17 nTPM: 324.3
Samples: 4
Max nTPM: 378.7
Min nTPM: 278.7
RHH5303_R3669
378.7
RHH5211_R3582
334.3
RHH5239_R3611
305.6
RHH5268_R3640
278.7
Memory CD4 T-cell Th17 nTPM: 337.9
Samples: 4
Max nTPM: 442.6
Min nTPM: 275.7
RHH5304_R3670
346.6
RHH5212_R3583
286.6
RHH5240_R3612
442.6
RHH5269_R3641
275.7
Memory CD4 T-cell Th2 nTPM: 320.7
Samples: 4
Max nTPM: 353.3
Min nTPM: 272.0
RHH5305_R3671
304.7
RHH5213_R3584
353.3
RHH5241_R3613
352.9
RHH5270_R3642
272.0
Naive CD4 T-cell nTPM: 314.5
Samples: 4
Max nTPM: 335.5
Min nTPM: 298.1
RHH5306_R3672
315.4
RHH5214_R3585
335.5
RHH5242_R3614
298.1
RHH5271_R3643
309.1
Naive CD8 T-cell nTPM: 354.0
Samples: 4
Max nTPM: 387.2
Min nTPM: 317.2
RHH5201_R3572
387.2
RHH5229_R3601
359.1
RHH5258_R3630
352.4
RHH5287_R3659
317.2
Non-Vd2 gdTCR nTPM: 334.5
Samples: 4
Max nTPM: 343.2
Min nTPM: 312.6
RHH5235_R3607
312.6
RHH5264_R3636
340.0
RHH5207_R3578
343.2
RHH5299_R3665
342.0
T-reg nTPM: 299.5
Samples: 4
Max nTPM: 338.3
Min nTPM: 251.9
RHH5301_R3667
251.9
RHH5237_R3609
338.3
RHH5266_R3638
292.4
RHH5209_R3580
315.2
Terminal effector memory CD4 T-cell nTPM: 384.9
Samples: 2
Max nTPM: 438.1
Min nTPM: 331.6
RHH5243_R3615
438.1
RHH5272_R3644
331.6
Terminal effector memory CD8 T-cell nTPM: 353.4
Samples: 4
Max nTPM: 379.0
Min nTPM: 308.8
RHH5232_R3604
365.2
RHH5204_R3575
360.5
RHH5261_R3633
379.0
RHH5296_R3662
308.8
Vd2 gdTCR nTPM: 329.9
Samples: 4
Max nTPM: 390.6
Min nTPM: 264.9
RHH5234_R3606
321.8
RHH5206_R3577
390.6
RHH5263_R3635
342.1
RHH5298_R3664
264.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.