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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
91.9
nTPM
Monaco:
224.0
nTPM
Schmiedel:
75.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
91.9
HPA sample
nTPM
gdT-cell nTPM: 89.4
Samples: 6
Max nTPM: 112.4
Min nTPM: 63.4
P10809_1007
70.7
P10809_1022
112.4
P10809_1041
110.1
P10809_1060
93.7
P10809_1077
63.4
P10809_1098
86.2
MAIT T-cell nTPM: 67.4
Samples: 6
Max nTPM: 77.8
Min nTPM: 43.9
P10809_1006
72.7
P10809_1024
77.1
P10809_1043
77.8
P10809_1062
59.4
P10809_1083
43.9
P10809_1097
73.4
Memory CD4 T-cell nTPM: 82.5
Samples: 6
Max nTPM: 92.9
Min nTPM: 66.3
P10809_1014
69.3
P10809_1026
92.8
P10809_1045
92.9
P10809_1064
83.3
P10809_1086
66.3
P10809_1113
90.1
Memory CD8 T-cell nTPM: 86.4
Samples: 5
Max nTPM: 98.8
Min nTPM: 77.1
P10809_1012
78.5
P10809_1027
77.1
P10809_1046
96.0
P10809_1065
81.5
P10809_1111
98.8
Naive CD4 T-cell nTPM: 67.3
Samples: 6
Max nTPM: 86.2
Min nTPM: 48.1
P10809_1015
48.1
P10809_1030
68.6
P10809_1049
86.2
P10809_1068
57.0
P10809_1085
75.4
P10809_1112
68.7
Naive CD8 T-cell nTPM: 65.2
Samples: 6
Max nTPM: 82.5
Min nTPM: 45.8
P10809_1016
45.8
P10809_1031
66.0
P10809_1050
72.5
P10809_1069
82.5
P10809_1087
65.0
P10809_1110
59.6
T-reg nTPM: 91.9
Samples: 6
Max nTPM: 103.3
Min nTPM: 82.0
P10809_1018
95.9
P10809_1037
82.0
P10809_1056
89.2
P10809_1075
87.7
P10809_1094
93.1
P10809_1106
103.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
224.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 165.6
Samples: 4
Max nTPM: 208.5
Min nTPM: 112.1
RHH5202_R3573
159.9
RHH5230_R3602
208.5
RHH5259_R3631
112.1
RHH5288_R3660
181.9
Effector memory CD8 T-cell nTPM: 218.8
Samples: 4
Max nTPM: 260.6
Min nTPM: 181.2
RHH5203_R3574
221.3
RHH5231_R3603
181.2
RHH5260_R3632
211.9
RHH5289_R3661
260.6
MAIT T-cell nTPM: 190.5
Samples: 4
Max nTPM: 211.0
Min nTPM: 150.8
RHH5233_R3605
194.7
RHH5205_R3576
211.0
RHH5262_R3634
205.6
RHH5297_R3663
150.8
Memory CD4 T-cell TFH nTPM: 182.4
Samples: 4
Max nTPM: 226.0
Min nTPM: 131.2
RHH5300_R3666
188.9
RHH5236_R3608
226.0
RHH5265_R3637
131.2
RHH5208_R3579
183.3
Memory CD4 T-cell Th1 nTPM: 155.8
Samples: 4
Max nTPM: 189.7
Min nTPM: 126.1
RHH5210_R3581
126.1
RHH5302_R3668
189.7
RHH5238_R3610
141.0
RHH5267_R3639
166.3
Memory CD4 T-cell Th1/Th17 nTPM: 176.1
Samples: 4
Max nTPM: 218.4
Min nTPM: 128.3
RHH5303_R3669
193.2
RHH5211_R3582
218.4
RHH5239_R3611
128.3
RHH5268_R3640
164.4
Memory CD4 T-cell Th17 nTPM: 189.5
Samples: 4
Max nTPM: 273.5
Min nTPM: 145.5
RHH5304_R3670
185.1
RHH5212_R3583
145.5
RHH5240_R3612
273.5
RHH5269_R3641
153.9
Memory CD4 T-cell Th2 nTPM: 190.6
Samples: 4
Max nTPM: 201.7
Min nTPM: 177.5
RHH5305_R3671
177.5
RHH5213_R3584
196.0
RHH5241_R3613
201.7
RHH5270_R3642
187.2
Naive CD4 T-cell nTPM: 152.2
Samples: 4
Max nTPM: 167.9
Min nTPM: 144.9
RHH5306_R3672
144.9
RHH5214_R3585
146.4
RHH5242_R3614
149.7
RHH5271_R3643
167.9
Naive CD8 T-cell nTPM: 106.4
Samples: 4
Max nTPM: 162.1
Min nTPM: 59.7
RHH5201_R3572
162.1
RHH5229_R3601
59.7
RHH5258_R3630
94.1
RHH5287_R3659
109.5
Non-Vd2 gdTCR nTPM: 224.0
Samples: 4
Max nTPM: 238.8
Min nTPM: 196.8
RHH5235_R3607
238.1
RHH5264_R3636
238.8
RHH5207_R3578
222.3
RHH5299_R3665
196.8
T-reg nTPM: 160.1
Samples: 4
Max nTPM: 225.5
Min nTPM: 124.2
RHH5301_R3667
125.7
RHH5237_R3609
225.5
RHH5266_R3638
164.9
RHH5209_R3580
124.2
Terminal effector memory CD4 T-cell nTPM: 188.5
Samples: 2
Max nTPM: 204.1
Min nTPM: 172.9
RHH5243_R3615
204.1
RHH5272_R3644
172.9
Terminal effector memory CD8 T-cell nTPM: 218.5
Samples: 4
Max nTPM: 260.2
Min nTPM: 170.0
RHH5232_R3604
260.2
RHH5204_R3575
170.0
RHH5261_R3633
245.1
RHH5296_R3662
198.7
Vd2 gdTCR nTPM: 179.4
Samples: 4
Max nTPM: 196.4
Min nTPM: 162.7
RHH5234_R3606
162.7
RHH5206_R3577
175.5
RHH5263_R3635
182.8
RHH5298_R3664
196.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
