HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:60.7 nTPM
HPA Brain:69.1 nTPM
GTEx:60.7 nTPM
FANTOM5:146.3 Scaled Tags Per Million
Pig:28.9 nTPM
Mouse:64.4 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018991Antibody HPA024087Antibody CAB075730Antibody CAB075731
Glial cells LowNot detectedMediumHigh
Neuronal cells MediumNot detectedLowHigh









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 69.1
Sample id Sample description nTPM
Hippocampus
nTPM: 65.9
1898 Male, age 80, left hemisphere 78.2
2529 Female, age 94, left hemisphere 67.9
1855 Male, age 76, left hemisphere 65.3
2148 Female, age 91, left hemisphere 63.5
2621 Female, age 67, right hemisphere 62.9
1911 Female, age 85, right hemisphere 57.9
Dentate gyrus
nTPM: 64.2
2530 Female, age 94, left hemisphere 69.8
2010 Male, age 76, both hemispheres 69.2
2528 Male, age 74, both hemispheres 68.0
2246 Female, age 85, both hemispheres 63.0
1927 Female, age 91, both hemispheres 62.1
2531 Female, age 67, both hemispheres 53.0
Entorhinal gyrus
nTPM: 62.3
2764 Male, age 80, right hemisphere 71.1
2117 Female, age 91, right hemisphere 70.5
1787 Male, age 76, left hemisphere 64.7
1938 Female, age 85, left hemisphere 63.8
2613 Female, age 94, left hemisphere 54.9
2686 Male, age 75, right hemisphere 48.7
Hippocampus, CA1
nTPM: 67.7
2749 Male, age 80, left hemisphere 86.2
2527 Male, age 74, both hemispheres 69.3
1873 Female, age 85, both hemispheres 67.2
2082 Female, age 91, right hemisphere 58.9
2045 Male, age 76, both hemispheres 56.7
Hippocampus, CA2
nTPM: 69.1
2249 Male, age 74, both hemispheres 76.6
1963 Male, age 80, left hemisphere 74.7
1892 Male, age 76, both hemispheres 73.2
2437 Female, age 94, left hemisphere 66.2
1940 Female, age 85, left hemisphere 64.2
2113 Female, age 91, right hemisphere 59.8
Hippocampus, CA3
nTPM: 65.1
2436 Male, age 74, both hemispheres 90.6
1867 Male, age 76, both hemispheres 61.9
2620 Female, age 94, left hemisphere 61.2
2137 Male, age 80, left hemisphere 60.8
1891 Female, age 85, both hemispheres 59.3
2861 Female, age 67, both hemispheres 56.7
Parahippocampal cortex
nTPM: 59.5
1933 Female, age 85, both hemispheres 66.3
1850 Male, age 80, both hemispheres 65.2
1990 Female, age 91, right hemisphere 62.6
2245 Female, age 91, both hemispheres 62.6
2250 Female, age 67, right hemisphere 60.3
2532 Female, age 72, left hemisphere 57.8
2622 Female, age 67, right hemisphere 56.8
2018 Male, age 76, both hemispheres 56.5
2692 Male, age 74, both hemispheres 56.1
2693 Female, age 94, both hemispheres 51.1
Perirhinal gyrus
nTPM: 65.6
1847 Female, age 91, left hemisphere 77.0
1794 Male, age 80, right hemisphere 71.7
1841 Female, age 85, right hemisphere 62.6
2521 Female, age 94, right hemisphere 59.0
2848 Male, age 76, right hemisphere 57.6
Subiculum
nTPM: 63.2
1977 Female, age 85, both hemispheres 67.4
2619 Male, age 74, both hemispheres 64.4
2438 Female, age 94, left hemisphere 63.7
1901 Male, age 80, both hemispheres 63.4
2729 Female, age 91, right hemisphere 62.6
2042 Male, age 76, both hemispheres 57.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 60.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.7
Samples: 197

Max nTPM: 107.4
Min nTPM: 34.7
Std nTPM: 10.8
Median nTPM: 59.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 107.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 99.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 97.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 88.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 84.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 84.0
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 83.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 81.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 80.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 80.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 80.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 146.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 146.3
FF:10169-103B7 60 years, female 189.0
FF:10153-102I9 76 years, female 103.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.9
Pig sample Sample description nTPM
Subiculum
nTPM: 25.7
Samples: 4

Max nTPM: 34.7
Min nTPM: 21.2
Sample A Female 34.7
Sample B Female 23.1
Sample C Male 23.7
Sample D Male 21.2
Dorsal hippocampus
nTPM: 28.9
Samples: 4

Max nTPM: 38.3
Min nTPM: 22.2
Sample A Female 38.3
Sample B Female 25.9
Sample C Male 29.1
Sample D Male 22.2
Entorhinal cortex
nTPM: 25.8
Samples: 4

Max nTPM: 28.4
Min nTPM: 21.6
Sample A Female 28.4
Sample B Female 28.3
Sample C Male 24.7
Sample D Male 21.6
Ventral hippocampus
nTPM: 28.2
Samples: 4

Max nTPM: 34.1
Min nTPM: 19.6
Sample A Female 29.5
Sample B Female 19.6
Sample C Male 34.1
Sample D Male 29.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 62.6
Samples: 4

Max nTPM: 69.5
Min nTPM: 57.3
Sample A Male 57.3
Sample B Male 58.4
Sample C Female 65.3
Sample D Female 69.5
Hippocampal formation
nTPM: 64.4
Samples: 4

Max nTPM: 68.8
Min nTPM: 60.3
Sample A Male 60.3
Sample B Male 62.8
Sample C Female 68.8
Sample D Female 65.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
70192129 Antisense, RP_050517_01_C12, Mouse strain C57BL/6J (56 days, male) 4.5
70919651 Antisense, RP_050713_01_G11, Mouse strain C57BL/6J (56 days, male) 0.0

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