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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
140.4
nTPM
Monaco:
226.2
nTPM
Schmiedel:
501.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
140.4
HPA sample
nTPM
gdT-cell nTPM: 103.2
Samples: 6
Max nTPM: 134.2
Min nTPM: 77.8
P10809_1007
77.8
P10809_1022
134.2
P10809_1041
125.1
P10809_1060
78.1
P10809_1077
93.9
P10809_1098
110.2
MAIT T-cell nTPM: 115.4
Samples: 6
Max nTPM: 143.9
Min nTPM: 92.5
P10809_1006
94.3
P10809_1024
124.8
P10809_1043
122.9
P10809_1062
114.2
P10809_1083
92.5
P10809_1097
143.9
Memory CD4 T-cell nTPM: 97.5
Samples: 6
Max nTPM: 120.8
Min nTPM: 82.3
P10809_1014
82.3
P10809_1026
100.0
P10809_1045
120.8
P10809_1064
89.0
P10809_1086
82.3
P10809_1113
110.3
Memory CD8 T-cell nTPM: 108.6
Samples: 5
Max nTPM: 128.0
Min nTPM: 91.3
P10809_1012
91.3
P10809_1027
110.7
P10809_1046
119.5
P10809_1065
93.5
P10809_1111
128.0
Naive CD4 T-cell nTPM: 91.9
Samples: 6
Max nTPM: 117.7
Min nTPM: 71.3
P10809_1015
71.3
P10809_1030
93.4
P10809_1049
117.7
P10809_1068
90.5
P10809_1085
80.5
P10809_1112
98.1
Naive CD8 T-cell nTPM: 95.6
Samples: 6
Max nTPM: 111.5
Min nTPM: 75.5
P10809_1016
75.5
P10809_1031
96.3
P10809_1050
90.4
P10809_1069
107.0
P10809_1087
92.7
P10809_1110
111.5
T-reg nTPM: 140.4
Samples: 6
Max nTPM: 180.7
Min nTPM: 109.9
P10809_1018
109.9
P10809_1037
180.7
P10809_1056
122.6
P10809_1075
127.5
P10809_1094
173.1
P10809_1106
128.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
226.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 191.6
Samples: 4
Max nTPM: 246.5
Min nTPM: 98.6
RHH5202_R3573
246.5
RHH5230_R3602
200.8
RHH5259_R3631
98.6
RHH5288_R3660
220.3
Effector memory CD8 T-cell nTPM: 226.3
Samples: 4
Max nTPM: 268.3
Min nTPM: 147.1
RHH5203_R3574
260.4
RHH5231_R3603
229.2
RHH5260_R3632
147.1
RHH5289_R3661
268.3
MAIT T-cell nTPM: 207.7
Samples: 4
Max nTPM: 223.7
Min nTPM: 186.3
RHH5233_R3605
223.7
RHH5205_R3576
215.2
RHH5262_R3634
186.3
RHH5297_R3663
205.4
Memory CD4 T-cell TFH nTPM: 172.2
Samples: 4
Max nTPM: 183.3
Min nTPM: 164.4
RHH5300_R3666
170.5
RHH5236_R3608
170.6
RHH5265_R3637
164.4
RHH5208_R3579
183.3
Memory CD4 T-cell Th1 nTPM: 178.8
Samples: 4
Max nTPM: 220.0
Min nTPM: 151.7
RHH5210_R3581
188.1
RHH5302_R3668
220.0
RHH5238_R3610
151.7
RHH5267_R3639
155.5
Memory CD4 T-cell Th1/Th17 nTPM: 178.3
Samples: 4
Max nTPM: 227.4
Min nTPM: 117.5
RHH5303_R3669
221.8
RHH5211_R3582
227.4
RHH5239_R3611
117.5
RHH5268_R3640
146.5
Memory CD4 T-cell Th17 nTPM: 173.1
Samples: 4
Max nTPM: 213.0
Min nTPM: 123.5
RHH5304_R3670
213.0
RHH5212_R3583
191.3
RHH5240_R3612
164.4
RHH5269_R3641
123.5
Memory CD4 T-cell Th2 nTPM: 201.3
Samples: 4
Max nTPM: 216.5
Min nTPM: 165.9
RHH5305_R3671
214.0
RHH5213_R3584
208.8
RHH5241_R3613
216.5
RHH5270_R3642
165.9
Naive CD4 T-cell nTPM: 170.3
Samples: 4
Max nTPM: 194.2
Min nTPM: 136.7
RHH5306_R3672
194.2
RHH5214_R3585
190.0
RHH5242_R3614
136.7
RHH5271_R3643
160.3
Naive CD8 T-cell nTPM: 163.8
Samples: 4
Max nTPM: 194.8
Min nTPM: 98.8
RHH5201_R3572
194.8
RHH5229_R3601
98.8
RHH5258_R3630
169.8
RHH5287_R3659
191.6
Non-Vd2 gdTCR nTPM: 216.4
Samples: 4
Max nTPM: 233.0
Min nTPM: 201.5
RHH5235_R3607
218.9
RHH5264_R3636
201.5
RHH5207_R3578
212.0
RHH5299_R3665
233.0
T-reg nTPM: 173.5
Samples: 4
Max nTPM: 192.2
Min nTPM: 151.5
RHH5301_R3667
192.2
RHH5237_R3609
178.7
RHH5266_R3638
151.5
RHH5209_R3580
171.4
Terminal effector memory CD4 T-cell nTPM: 207.5
Samples: 2
Max nTPM: 233.6
Min nTPM: 181.4
RHH5243_R3615
233.6
RHH5272_R3644
181.4
Terminal effector memory CD8 T-cell nTPM: 211.4
Samples: 4
Max nTPM: 246.6
Min nTPM: 150.0
RHH5232_R3604
246.3
RHH5204_R3575
202.8
RHH5261_R3633
150.0
RHH5296_R3662
246.6
Vd2 gdTCR nTPM: 207.4
Samples: 4
Max nTPM: 260.5
Min nTPM: 164.0
RHH5234_R3606
214.4
RHH5206_R3577
260.5
RHH5263_R3635
164.0
RHH5298_R3664
190.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
