HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:160.5 nTPM
HPA Brain:52.4 nTPM
GTEx:160.5 nTPM
FANTOM5:106.0 Scaled Tags Per Million
Pig:206.6 nTPM
Mouse:243.3 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045446
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.4
Sample id Sample description nTPM
Hippocampus
nTPM: 44.7
1898 Male, age 80, left hemisphere 59.1
2529 Female, age 94, left hemisphere 45.2
2621 Female, age 67, right hemisphere 43.9
1911 Female, age 85, right hemisphere 40.6
2148 Female, age 91, left hemisphere 39.6
1855 Male, age 76, left hemisphere 39.5
Dentate gyrus
nTPM: 45.7
2010 Male, age 76, both hemispheres 52.7
2528 Male, age 74, both hemispheres 49.4
2530 Female, age 94, left hemisphere 48.0
1927 Female, age 91, both hemispheres 44.6
2246 Female, age 85, both hemispheres 44.4
2531 Female, age 67, both hemispheres 35.3
Entorhinal gyrus
nTPM: 45.2
2764 Male, age 80, right hemisphere 54.1
1787 Male, age 76, left hemisphere 51.1
1938 Female, age 85, left hemisphere 45.2
2117 Female, age 91, right hemisphere 44.0
2686 Male, age 75, right hemisphere 43.4
2613 Female, age 94, left hemisphere 33.6
Hippocampus, CA1
nTPM: 50.3
2749 Male, age 80, left hemisphere 73.2
1873 Female, age 85, both hemispheres 49.2
2527 Male, age 74, both hemispheres 48.4
2082 Female, age 91, right hemisphere 41.6
2045 Male, age 76, both hemispheres 39.1
Hippocampus, CA2
nTPM: 49.7
2249 Male, age 74, both hemispheres 58.1
1963 Male, age 80, left hemisphere 57.5
1892 Male, age 76, both hemispheres 51.2
2437 Female, age 94, left hemisphere 50.2
2113 Female, age 91, right hemisphere 42.0
1940 Female, age 85, left hemisphere 39.5
Hippocampus, CA3
nTPM: 46.1
2436 Male, age 74, both hemispheres 56.7
1867 Male, age 76, both hemispheres 54.9
2137 Male, age 80, left hemisphere 53.3
1891 Female, age 85, both hemispheres 39.8
2620 Female, age 94, left hemisphere 37.8
2861 Female, age 67, both hemispheres 34.3
Parahippocampal cortex
nTPM: 43.7
2250 Female, age 67, right hemisphere 50.4
1933 Female, age 85, both hemispheres 48.6
1850 Male, age 80, both hemispheres 48.5
1990 Female, age 91, right hemisphere 46.9
2532 Female, age 72, left hemisphere 46.5
2245 Female, age 91, both hemispheres 45.7
2018 Male, age 76, both hemispheres 45.2
2692 Male, age 74, both hemispheres 36.5
2693 Female, age 94, both hemispheres 36.3
2622 Female, age 67, right hemisphere 32.8
Perirhinal gyrus
nTPM: 52.4
1847 Female, age 91, left hemisphere 62.6
1794 Male, age 80, right hemisphere 60.8
1841 Female, age 85, right hemisphere 53.8
2521 Female, age 94, right hemisphere 47.6
2848 Male, age 76, right hemisphere 37.4
Subiculum
nTPM: 48.4
2438 Female, age 94, left hemisphere 67.5
1977 Female, age 85, both hemispheres 55.8
2729 Female, age 91, right hemisphere 45.2
1901 Male, age 80, both hemispheres 41.8
2619 Male, age 74, both hemispheres 40.3
2042 Male, age 76, both hemispheres 39.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 160.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 160.5
Samples: 197

Max nTPM: 324.7
Min nTPM: 80.7
Std nTPM: 36.4
Median nTPM: 156.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 324.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 322.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 280.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 280.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 262.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 253.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 248.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 233.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 227.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 225.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 222.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 106.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 106.0
FF:10169-103B7 60 years, female 106.9
FF:10153-102I9 76 years, female 105.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 206.6
Pig sample Sample description nTPM
Subiculum
nTPM: 159.4
Samples: 4

Max nTPM: 206.0
Min nTPM: 133.7
Sample A Female 206.0
Sample B Female 153.7
Sample C Male 133.7
Sample D Male 144.3
Dorsal hippocampus
nTPM: 206.7
Samples: 4

Max nTPM: 279.3
Min nTPM: 153.4
Sample A Female 279.3
Sample B Female 196.1
Sample C Male 197.8
Sample D Male 153.4
Entorhinal cortex
nTPM: 159.1
Samples: 4

Max nTPM: 185.0
Min nTPM: 116.5
Sample A Female 164.7
Sample B Female 185.0
Sample C Male 170.2
Sample D Male 116.5
Ventral hippocampus
nTPM: 185.1
Samples: 4

Max nTPM: 207.3
Min nTPM: 147.8
Sample A Female 191.5
Sample B Female 147.8
Sample C Male 207.3
Sample D Male 193.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 243.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 230.0
Samples: 4

Max nTPM: 250.3
Min nTPM: 220.8
Sample A Male 220.8
Sample B Male 221.9
Sample C Female 250.3
Sample D Female 226.8
Hippocampal formation
nTPM: 243.3
Samples: 4

Max nTPM: 267.5
Min nTPM: 221.7
Sample A Male 267.5
Sample B Male 221.7
Sample C Female 238.0
Sample D Female 245.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
68910971 Antisense, RP_050118_02_H06, Mouse strain C57BL/6J (56 days, male) 1.3

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