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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
149.5
nTPM
Monaco:
266.4
nTPM
Schmiedel:
168.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
149.5
HPA sample
nTPM
gdT-cell nTPM: 144.3
Samples: 6
Max nTPM: 179.2
Min nTPM: 125.4
P10809_1007
125.4
P10809_1022
156.5
P10809_1041
179.2
P10809_1060
130.6
P10809_1077
130.1
P10809_1098
144.0
MAIT T-cell nTPM: 142.4
Samples: 6
Max nTPM: 159.6
Min nTPM: 118.7
P10809_1006
140.3
P10809_1024
148.0
P10809_1043
140.6
P10809_1062
159.6
P10809_1083
118.7
P10809_1097
147.0
Memory CD4 T-cell nTPM: 135.1
Samples: 6
Max nTPM: 153.6
Min nTPM: 127.0
P10809_1014
129.1
P10809_1026
127.0
P10809_1045
153.6
P10809_1064
127.7
P10809_1086
143.2
P10809_1113
129.8
Memory CD8 T-cell nTPM: 149.5
Samples: 5
Max nTPM: 157.4
Min nTPM: 142.7
P10809_1012
147.6
P10809_1027
150.3
P10809_1046
149.4
P10809_1065
157.4
P10809_1111
142.7
Naive CD4 T-cell nTPM: 134.6
Samples: 6
Max nTPM: 150.7
Min nTPM: 112.3
P10809_1015
133.4
P10809_1030
139.3
P10809_1049
134.6
P10809_1068
150.7
P10809_1085
137.3
P10809_1112
112.3
Naive CD8 T-cell nTPM: 138.4
Samples: 6
Max nTPM: 157.8
Min nTPM: 120.4
P10809_1016
122.8
P10809_1031
147.6
P10809_1050
141.1
P10809_1069
157.8
P10809_1087
140.4
P10809_1110
120.4
T-reg nTPM: 143.5
Samples: 6
Max nTPM: 172.7
Min nTPM: 114.3
P10809_1018
114.3
P10809_1037
146.7
P10809_1056
149.6
P10809_1075
140.2
P10809_1094
137.4
P10809_1106
172.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
266.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 181.2
Samples: 4
Max nTPM: 213.1
Min nTPM: 137.6
RHH5202_R3573
213.1
RHH5230_R3602
185.9
RHH5259_R3631
137.6
RHH5288_R3660
188.2
Effector memory CD8 T-cell nTPM: 266.4
Samples: 4
Max nTPM: 303.9
Min nTPM: 194.5
RHH5203_R3574
303.9
RHH5231_R3603
286.9
RHH5260_R3632
194.5
RHH5289_R3661
280.1
MAIT T-cell nTPM: 244.0
Samples: 4
Max nTPM: 272.3
Min nTPM: 190.3
RHH5233_R3605
255.4
RHH5205_R3576
190.3
RHH5262_R3634
272.3
RHH5297_R3663
257.8
Memory CD4 T-cell TFH nTPM: 196.4
Samples: 4
Max nTPM: 229.6
Min nTPM: 176.3
RHH5300_R3666
194.2
RHH5236_R3608
176.3
RHH5265_R3637
229.6
RHH5208_R3579
185.3
Memory CD4 T-cell Th1 nTPM: 179.2
Samples: 4
Max nTPM: 211.1
Min nTPM: 109.6
RHH5210_R3581
209.8
RHH5302_R3668
211.1
RHH5238_R3610
109.6
RHH5267_R3639
186.1
Memory CD4 T-cell Th1/Th17 nTPM: 198.7
Samples: 4
Max nTPM: 246.8
Min nTPM: 114.3
RHH5303_R3669
246.8
RHH5211_R3582
235.2
RHH5239_R3611
114.3
RHH5268_R3640
198.4
Memory CD4 T-cell Th17 nTPM: 173.0
Samples: 4
Max nTPM: 209.9
Min nTPM: 148.9
RHH5304_R3670
180.6
RHH5212_R3583
209.9
RHH5240_R3612
152.4
RHH5269_R3641
148.9
Memory CD4 T-cell Th2 nTPM: 209.4
Samples: 4
Max nTPM: 220.4
Min nTPM: 199.7
RHH5305_R3671
201.6
RHH5213_R3584
215.7
RHH5241_R3613
220.4
RHH5270_R3642
199.7
Naive CD4 T-cell nTPM: 174.6
Samples: 4
Max nTPM: 184.7
Min nTPM: 149.5
RHH5306_R3672
184.7
RHH5214_R3585
181.7
RHH5242_R3614
149.5
RHH5271_R3643
182.4
Naive CD8 T-cell nTPM: 158.5
Samples: 4
Max nTPM: 193.6
Min nTPM: 104.3
RHH5201_R3572
193.6
RHH5229_R3601
104.3
RHH5258_R3630
162.6
RHH5287_R3659
173.3
Non-Vd2 gdTCR nTPM: 229.2
Samples: 4
Max nTPM: 297.4
Min nTPM: 183.7
RHH5235_R3607
183.7
RHH5264_R3636
297.4
RHH5207_R3578
235.6
RHH5299_R3665
200.0
T-reg nTPM: 205.3
Samples: 4
Max nTPM: 218.3
Min nTPM: 196.7
RHH5301_R3667
196.7
RHH5237_R3609
206.8
RHH5266_R3638
218.3
RHH5209_R3580
199.2
Terminal effector memory CD4 T-cell nTPM: 215.8
Samples: 2
Max nTPM: 219.2
Min nTPM: 212.4
RHH5243_R3615
212.4
RHH5272_R3644
219.2
Terminal effector memory CD8 T-cell nTPM: 231.7
Samples: 4
Max nTPM: 251.0
Min nTPM: 203.6
RHH5232_R3604
251.0
RHH5204_R3575
230.9
RHH5261_R3633
203.6
RHH5296_R3662
241.2
Vd2 gdTCR nTPM: 239.8
Samples: 4
Max nTPM: 298.6
Min nTPM: 189.9
RHH5234_R3606
255.5
RHH5206_R3577
298.6
RHH5263_R3635
215.3
RHH5298_R3664
189.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
