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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
147.4
nTPM
Monaco:
322.8
nTPM
Schmiedel:
247.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
147.4
HPA sample
nTPM
gdT-cell nTPM: 127.2
Samples: 6
Max nTPM: 171.8
Min nTPM: 97.6
P10809_1007
107.6
P10809_1022
141.3
P10809_1041
171.8
P10809_1060
97.6
P10809_1077
107.7
P10809_1098
136.9
MAIT T-cell nTPM: 128.3
Samples: 6
Max nTPM: 137.3
Min nTPM: 115.8
P10809_1006
125.4
P10809_1024
122.4
P10809_1043
137.3
P10809_1062
131.5
P10809_1083
115.8
P10809_1097
137.1
Memory CD4 T-cell nTPM: 125.7
Samples: 6
Max nTPM: 142.9
Min nTPM: 104.0
P10809_1014
119.3
P10809_1026
142.5
P10809_1045
142.9
P10809_1064
113.0
P10809_1086
104.0
P10809_1113
132.5
Memory CD8 T-cell nTPM: 127.0
Samples: 5
Max nTPM: 162.8
Min nTPM: 98.4
P10809_1012
121.7
P10809_1027
98.4
P10809_1046
162.8
P10809_1065
120.7
P10809_1111
131.2
Naive CD4 T-cell nTPM: 128.2
Samples: 6
Max nTPM: 147.8
Min nTPM: 103.2
P10809_1015
142.4
P10809_1030
103.2
P10809_1049
147.8
P10809_1068
121.6
P10809_1085
115.0
P10809_1112
139.3
Naive CD8 T-cell nTPM: 126.8
Samples: 6
Max nTPM: 148.6
Min nTPM: 101.1
P10809_1016
118.9
P10809_1031
132.6
P10809_1050
117.0
P10809_1069
142.6
P10809_1087
101.1
P10809_1110
148.6
T-reg nTPM: 147.4
Samples: 6
Max nTPM: 189.2
Min nTPM: 84.1
P10809_1018
116.8
P10809_1037
149.6
P10809_1056
167.8
P10809_1075
84.1
P10809_1094
177.1
P10809_1106
189.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
322.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 264.8
Samples: 4
Max nTPM: 351.8
Min nTPM: 172.2
RHH5202_R3573
351.8
RHH5230_R3602
274.5
RHH5259_R3631
172.2
RHH5288_R3660
260.6
Effector memory CD8 T-cell nTPM: 322.8
Samples: 4
Max nTPM: 423.1
Min nTPM: 220.4
RHH5203_R3574
423.1
RHH5231_R3603
327.8
RHH5260_R3632
220.4
RHH5289_R3661
319.8
MAIT T-cell nTPM: 309.0
Samples: 4
Max nTPM: 325.6
Min nTPM: 281.7
RHH5233_R3605
325.6
RHH5205_R3576
318.7
RHH5262_R3634
309.8
RHH5297_R3663
281.7
Memory CD4 T-cell TFH nTPM: 267.5
Samples: 4
Max nTPM: 339.2
Min nTPM: 238.2
RHH5300_R3666
239.2
RHH5236_R3608
238.2
RHH5265_R3637
253.5
RHH5208_R3579
339.2
Memory CD4 T-cell Th1 nTPM: 253.4
Samples: 4
Max nTPM: 329.4
Min nTPM: 200.3
RHH5210_R3581
329.4
RHH5302_R3668
271.2
RHH5238_R3610
200.3
RHH5267_R3639
212.8
Memory CD4 T-cell Th1/Th17 nTPM: 231.5
Samples: 4
Max nTPM: 332.6
Min nTPM: 146.6
RHH5303_R3669
237.4
RHH5211_R3582
332.6
RHH5239_R3611
146.6
RHH5268_R3640
209.2
Memory CD4 T-cell Th17 nTPM: 229.0
Samples: 4
Max nTPM: 308.0
Min nTPM: 172.8
RHH5304_R3670
257.9
RHH5212_R3583
308.0
RHH5240_R3612
172.8
RHH5269_R3641
177.4
Memory CD4 T-cell Th2 nTPM: 284.5
Samples: 4
Max nTPM: 332.5
Min nTPM: 245.1
RHH5305_R3671
277.9
RHH5213_R3584
332.5
RHH5241_R3613
282.5
RHH5270_R3642
245.1
Naive CD4 T-cell nTPM: 233.1
Samples: 4
Max nTPM: 282.5
Min nTPM: 190.8
RHH5306_R3672
221.0
RHH5214_R3585
282.5
RHH5242_R3614
238.2
RHH5271_R3643
190.8
Naive CD8 T-cell nTPM: 246.2
Samples: 4
Max nTPM: 381.7
Min nTPM: 146.2
RHH5201_R3572
381.7
RHH5229_R3601
146.2
RHH5258_R3630
253.2
RHH5287_R3659
203.7
Non-Vd2 gdTCR nTPM: 322.5
Samples: 4
Max nTPM: 397.5
Min nTPM: 276.9
RHH5235_R3607
310.2
RHH5264_R3636
305.4
RHH5207_R3578
397.5
RHH5299_R3665
276.9
T-reg nTPM: 273.7
Samples: 4
Max nTPM: 336.2
Min nTPM: 224.4
RHH5301_R3667
281.7
RHH5237_R3609
252.5
RHH5266_R3638
224.4
RHH5209_R3580
336.2
Terminal effector memory CD4 T-cell nTPM: 287.2
Samples: 2
Max nTPM: 305.1
Min nTPM: 269.2
RHH5243_R3615
269.2
RHH5272_R3644
305.1
Terminal effector memory CD8 T-cell nTPM: 304.7
Samples: 4
Max nTPM: 367.3
Min nTPM: 262.0
RHH5232_R3604
322.1
RHH5204_R3575
367.3
RHH5261_R3633
262.0
RHH5296_R3662
267.5
Vd2 gdTCR nTPM: 304.3
Samples: 4
Max nTPM: 380.1
Min nTPM: 237.1
RHH5234_R3606
359.0
RHH5206_R3577
380.1
RHH5263_R3635
237.1
RHH5298_R3664
240.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.