HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:21.9 nTPM
HPA Brain:50.9 nTPM
GTEx:21.9 nTPM
FANTOM5:55.0 Scaled Tags Per Million
Pig:30.0 nTPM
Mouse:32.3 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.9
Sample id Sample description nTPM
Hippocampus
nTPM: 42.3
1855 Male, age 76, left hemisphere 49.2
2148 Female, age 91, left hemisphere 43.3
2621 Female, age 67, right hemisphere 43.1
2529 Female, age 94, left hemisphere 42.9
1911 Female, age 85, right hemisphere 40.1
1898 Male, age 80, left hemisphere 35.5
Dentate gyrus
nTPM: 44.7
2010 Male, age 76, both hemispheres 55.1
2531 Female, age 67, both hemispheres 49.2
2528 Male, age 74, both hemispheres 44.8
2246 Female, age 85, both hemispheres 44.1
2530 Female, age 94, left hemisphere 38.0
1927 Female, age 91, both hemispheres 36.9
Entorhinal gyrus
nTPM: 47.8
1787 Male, age 76, left hemisphere 52.8
2686 Male, age 75, right hemisphere 52.3
2613 Female, age 94, left hemisphere 48.8
2764 Male, age 80, right hemisphere 46.3
2117 Female, age 91, right hemisphere 45.8
1938 Female, age 85, left hemisphere 40.8
Hippocampus, CA1
nTPM: 45.8
2045 Male, age 76, both hemispheres 54.9
2082 Female, age 91, right hemisphere 46.9
2749 Male, age 80, left hemisphere 44.6
2527 Male, age 74, both hemispheres 43.2
1873 Female, age 85, both hemispheres 39.5
Hippocampus, CA2
nTPM: 40.1
2249 Male, age 74, both hemispheres 45.6
1940 Female, age 85, left hemisphere 44.2
2113 Female, age 91, right hemisphere 43.5
2437 Female, age 94, left hemisphere 38.6
1963 Male, age 80, left hemisphere 35.5
1892 Male, age 76, both hemispheres 32.9
Hippocampus, CA3
nTPM: 50.9
2620 Female, age 94, left hemisphere 66.7
2436 Male, age 74, both hemispheres 56.6
2861 Female, age 67, both hemispheres 56.6
1891 Female, age 85, both hemispheres 44.4
2137 Male, age 80, left hemisphere 40.7
1867 Male, age 76, both hemispheres 40.3
Parahippocampal cortex
nTPM: 45.5
2622 Female, age 67, right hemisphere 56.6
2018 Male, age 76, both hemispheres 50.4
2245 Female, age 91, both hemispheres 45.7
2692 Male, age 74, both hemispheres 45.7
1990 Female, age 91, right hemisphere 45.6
2693 Female, age 94, both hemispheres 45.3
1933 Female, age 85, both hemispheres 43.9
2532 Female, age 72, left hemisphere 42.5
1850 Male, age 80, both hemispheres 40.8
2250 Female, age 67, right hemisphere 38.5
Perirhinal gyrus
nTPM: 42.5
1794 Male, age 80, right hemisphere 48.5
2521 Female, age 94, right hemisphere 44.9
1841 Female, age 85, right hemisphere 43.3
2848 Male, age 76, right hemisphere 38.3
1847 Female, age 91, left hemisphere 37.5
Subiculum
nTPM: 46.6
2042 Male, age 76, both hemispheres 62.9
2619 Male, age 74, both hemispheres 50.2
2729 Female, age 91, right hemisphere 43.7
2438 Female, age 94, left hemisphere 42.6
1901 Male, age 80, both hemispheres 40.3
1977 Female, age 85, both hemispheres 40.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.9
Samples: 197

Max nTPM: 71.5
Min nTPM: 5.8
Std nTPM: 11.3
Median nTPM: 19.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 71.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 59.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 59.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 52.4
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 52.3
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 50.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 49.2
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 47.6
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 45.0
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 44.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 43.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.0
FF:10153-102I9 76 years, female 65.3
FF:10169-103B7 60 years, female 44.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.0
Pig sample Sample description nTPM
Subiculum
nTPM: 24.6
Samples: 4

Max nTPM: 32.7
Min nTPM: 20.6
Sample A Female 24.0
Sample B Female 21.1
Sample C Male 32.7
Sample D Male 20.6
Dorsal hippocampus
nTPM: 22.9
Samples: 4

Max nTPM: 31.4
Min nTPM: 17.7
Sample A Female 19.8
Sample B Female 22.5
Sample C Male 31.4
Sample D Male 17.7
Entorhinal cortex
nTPM: 30.0
Samples: 4

Max nTPM: 32.8
Min nTPM: 22.2
Sample A Female 32.4
Sample B Female 22.2
Sample C Male 32.6
Sample D Male 32.8
Ventral hippocampus
nTPM: 26.0
Samples: 4

Max nTPM: 41.4
Min nTPM: 17.0
Sample A Female 17.0
Sample B Female 20.4
Sample C Male 41.4
Sample D Male 25.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.3
Samples: 4

Max nTPM: 46.6
Min nTPM: 25.3
Sample A Male 30.2
Sample B Male 46.6
Sample C Female 25.3
Sample D Female 27.2
Hippocampal formation
nTPM: 21.8
Samples: 4

Max nTPM: 23.4
Min nTPM: 20.0
Sample A Male 20.0
Sample B Male 22.6
Sample C Female 23.4
Sample D Female 21.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
791 Antisense, RP_040507_01_H06, Mouse strain C57BL/6J (56 days, male) 7.4
792 Antisense, RP_040507_01_H06, Mouse strain C57BL/6J (56 days, male) 3.0
71161141 Antisense, RP_050810_02_G05, Mouse strain C57BL/6J (56 days, male) 0.4

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