HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:75.2 nTPM
HPA Brain:59.1 nTPM
GTEx:75.2 nTPM
FANTOM5:98.4 Scaled Tags Per Million
Pig:83.4 nTPM
Mouse:15.6 nTPM
Allen mouse:6.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.1
Sample id Sample description nTPM
Hippocampus
nTPM: 59.1
2529 Female, age 94, left hemisphere 63.3
1898 Male, age 80, left hemisphere 62.2
1911 Female, age 85, right hemisphere 59.1
2148 Female, age 91, left hemisphere 58.9
2621 Female, age 67, right hemisphere 55.8
1855 Male, age 76, left hemisphere 55.4
Dentate gyrus
nTPM: 57.0
2530 Female, age 94, left hemisphere 73.6
2010 Male, age 76, both hemispheres 61.5
2246 Female, age 85, both hemispheres 53.5
1927 Female, age 91, both hemispheres 51.4
2531 Female, age 67, both hemispheres 51.1
2528 Male, age 74, both hemispheres 50.7
Entorhinal gyrus
nTPM: 51.7
2117 Female, age 91, right hemisphere 66.0
2686 Male, age 75, right hemisphere 63.8
1938 Female, age 85, left hemisphere 50.5
2764 Male, age 80, right hemisphere 48.4
2613 Female, age 94, left hemisphere 41.5
1787 Male, age 76, left hemisphere 39.8
Hippocampus, CA1
nTPM: 55.7
2749 Male, age 80, left hemisphere 64.8
2082 Female, age 91, right hemisphere 57.0
1873 Female, age 85, both hemispheres 55.8
2527 Male, age 74, both hemispheres 51.9
2045 Male, age 76, both hemispheres 48.9
Hippocampus, CA2
nTPM: 58.3
1963 Male, age 80, left hemisphere 70.8
1940 Female, age 85, left hemisphere 62.4
2113 Female, age 91, right hemisphere 55.0
1892 Male, age 76, both hemispheres 54.1
2249 Male, age 74, both hemispheres 53.9
2437 Female, age 94, left hemisphere 53.8
Hippocampus, CA3
nTPM: 53.6
2137 Male, age 80, left hemisphere 64.1
1891 Female, age 85, both hemispheres 64.0
1867 Male, age 76, both hemispheres 56.9
2861 Female, age 67, both hemispheres 48.2
2436 Male, age 74, both hemispheres 47.4
2620 Female, age 94, left hemisphere 41.2
Parahippocampal cortex
nTPM: 47.8
1850 Male, age 80, both hemispheres 57.7
2692 Male, age 74, both hemispheres 57.7
1990 Female, age 91, right hemisphere 51.0
2245 Female, age 91, both hemispheres 50.7
2532 Female, age 72, left hemisphere 48.9
2018 Male, age 76, both hemispheres 47.8
1933 Female, age 85, both hemispheres 42.6
2622 Female, age 67, right hemisphere 42.1
2693 Female, age 94, both hemispheres 40.7
2250 Female, age 67, right hemisphere 39.1
Perirhinal gyrus
nTPM: 43.5
1847 Female, age 91, left hemisphere 46.9
1794 Male, age 80, right hemisphere 46.6
1841 Female, age 85, right hemisphere 45.7
2848 Male, age 76, right hemisphere 40.5
2521 Female, age 94, right hemisphere 38.1
Subiculum
nTPM: 59.0
1901 Male, age 80, both hemispheres 67.4
2438 Female, age 94, left hemisphere 65.3
2042 Male, age 76, both hemispheres 62.3
2729 Female, age 91, right hemisphere 60.2
1977 Female, age 85, both hemispheres 51.6
2619 Male, age 74, both hemispheres 47.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 75.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 75.2
Samples: 197

Max nTPM: 190.6
Min nTPM: 18.5
Std nTPM: 28.5
Median nTPM: 69.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 190.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 184.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 173.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 156.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 154.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 149.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 147.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 134.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 133.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 131.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 129.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.4
FF:10153-102I9 76 years, female 100.3
FF:10169-103B7 60 years, female 96.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 83.4
Pig sample Sample description nTPM
Subiculum
nTPM: 67.6
Samples: 4

Max nTPM: 78.3
Min nTPM: 61.6
Sample A Female 78.3
Sample B Female 65.2
Sample C Male 61.6
Sample D Male 65.1
Dorsal hippocampus
nTPM: 83.4
Samples: 4

Max nTPM: 93.6
Min nTPM: 73.2
Sample A Female 92.9
Sample B Female 73.8
Sample C Male 93.6
Sample D Male 73.2
Entorhinal cortex
nTPM: 63.4
Samples: 4

Max nTPM: 67.3
Min nTPM: 61.1
Sample A Female 63.2
Sample B Female 67.3
Sample C Male 61.1
Sample D Male 61.8
Ventral hippocampus
nTPM: 73.0
Samples: 4

Max nTPM: 84.3
Min nTPM: 62.0
Sample A Female 70.8
Sample B Female 62.0
Sample C Male 74.9
Sample D Male 84.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 16.3
Min nTPM: 15.1
Sample A Male 16.3
Sample B Male 15.6
Sample C Female 15.3
Sample D Female 15.1
Hippocampal formation
nTPM: 14.8
Samples: 4

Max nTPM: 19.8
Min nTPM: 9.9
Sample A Male 9.9
Sample B Male 19.8
Sample C Female 13.5
Sample D Female 15.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.7
70231098 Antisense, RP_050526_01_C01, Mouse strain C57BL/6J (56 days, male) 6.7

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