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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
87.4
nTPM
Monaco:
92.3
nTPM
Schmiedel:
156.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
87.4
HPA sample
nTPM
gdT-cell nTPM: 81.2
Samples: 6
Max nTPM: 123.6
Min nTPM: 45.9
P10809_1007
45.9
P10809_1022
100.5
P10809_1041
123.6
P10809_1060
75.5
P10809_1077
56.4
P10809_1098
85.1
MAIT T-cell nTPM: 87.5
Samples: 6
Max nTPM: 126.4
Min nTPM: 50.3
P10809_1006
50.3
P10809_1024
126.4
P10809_1043
92.9
P10809_1062
89.7
P10809_1083
71.9
P10809_1097
93.5
Memory CD4 T-cell nTPM: 67.0
Samples: 6
Max nTPM: 95.0
Min nTPM: 39.9
P10809_1014
39.9
P10809_1026
67.4
P10809_1045
53.7
P10809_1064
65.2
P10809_1086
80.5
P10809_1113
95.0
Memory CD8 T-cell nTPM: 69.2
Samples: 5
Max nTPM: 95.5
Min nTPM: 42.6
P10809_1012
42.6
P10809_1027
95.5
P10809_1046
51.7
P10809_1065
66.4
P10809_1111
89.7
Naive CD4 T-cell nTPM: 63.3
Samples: 6
Max nTPM: 83.3
Min nTPM: 24.4
P10809_1015
46.9
P10809_1030
80.2
P10809_1049
24.4
P10809_1068
68.2
P10809_1085
83.3
P10809_1112
77.0
Naive CD8 T-cell nTPM: 73.5
Samples: 6
Max nTPM: 84.0
Min nTPM: 54.8
P10809_1016
54.8
P10809_1031
82.8
P10809_1050
72.3
P10809_1069
79.0
P10809_1087
84.0
P10809_1110
68.3
T-reg nTPM: 82.2
Samples: 6
Max nTPM: 94.9
Min nTPM: 63.3
P10809_1018
83.0
P10809_1037
84.8
P10809_1056
63.3
P10809_1075
83.3
P10809_1094
94.9
P10809_1106
83.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
92.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 50.8
Samples: 4
Max nTPM: 83.2
Min nTPM: 36.8
RHH5202_R3573
83.2
RHH5230_R3602
38.0
RHH5259_R3631
36.8
RHH5288_R3660
45.1
Effector memory CD8 T-cell nTPM: 79.9
Samples: 4
Max nTPM: 89.2
Min nTPM: 70.5
RHH5203_R3574
70.5
RHH5231_R3603
89.2
RHH5260_R3632
87.2
RHH5289_R3661
72.6
MAIT T-cell nTPM: 70.7
Samples: 4
Max nTPM: 85.6
Min nTPM: 60.5
RHH5233_R3605
68.8
RHH5205_R3576
60.5
RHH5262_R3634
67.8
RHH5297_R3663
85.6
Memory CD4 T-cell TFH nTPM: 66.3
Samples: 4
Max nTPM: 103.4
Min nTPM: 48.6
RHH5300_R3666
48.6
RHH5236_R3608
103.4
RHH5265_R3637
51.1
RHH5208_R3579
61.9
Memory CD4 T-cell Th1 nTPM: 57.0
Samples: 4
Max nTPM: 77.8
Min nTPM: 41.3
RHH5210_R3581
66.5
RHH5302_R3668
77.8
RHH5238_R3610
41.3
RHH5267_R3639
42.5
Memory CD4 T-cell Th1/Th17 nTPM: 68.6
Samples: 4
Max nTPM: 101.7
Min nTPM: 25.8
RHH5303_R3669
98.0
RHH5211_R3582
101.7
RHH5239_R3611
25.8
RHH5268_R3640
48.8
Memory CD4 T-cell Th17 nTPM: 79.2
Samples: 4
Max nTPM: 97.6
Min nTPM: 45.3
RHH5304_R3670
81.8
RHH5212_R3583
97.6
RHH5240_R3612
92.0
RHH5269_R3641
45.3
Memory CD4 T-cell Th2 nTPM: 69.4
Samples: 4
Max nTPM: 89.6
Min nTPM: 45.8
RHH5305_R3671
78.0
RHH5213_R3584
89.6
RHH5241_R3613
64.2
RHH5270_R3642
45.8
Naive CD4 T-cell nTPM: 68.8
Samples: 4
Max nTPM: 91.9
Min nTPM: 56.8
RHH5306_R3672
67.5
RHH5214_R3585
91.9
RHH5242_R3614
56.8
RHH5271_R3643
59.0
Naive CD8 T-cell nTPM: 59.8
Samples: 4
Max nTPM: 69.3
Min nTPM: 53.4
RHH5201_R3572
58.4
RHH5229_R3601
53.4
RHH5258_R3630
69.3
RHH5287_R3659
57.9
Non-Vd2 gdTCR nTPM: 72.7
Samples: 4
Max nTPM: 113.0
Min nTPM: 50.8
RHH5235_R3607
50.8
RHH5264_R3636
113.0
RHH5207_R3578
63.0
RHH5299_R3665
63.9
T-reg nTPM: 73.6
Samples: 4
Max nTPM: 99.6
Min nTPM: 53.9
RHH5301_R3667
61.2
RHH5237_R3609
99.6
RHH5266_R3638
53.9
RHH5209_R3580
79.8
Terminal effector memory CD4 T-cell nTPM: 47.9
Samples: 2
Max nTPM: 53.7
Min nTPM: 42.1
RHH5243_R3615
42.1
RHH5272_R3644
53.7
Terminal effector memory CD8 T-cell nTPM: 77.6
Samples: 4
Max nTPM: 94.8
Min nTPM: 57.9
RHH5232_R3604
69.7
RHH5204_R3575
57.9
RHH5261_R3633
88.1
RHH5296_R3662
94.8
Vd2 gdTCR nTPM: 92.3
Samples: 4
Max nTPM: 103.0
Min nTPM: 75.2
RHH5234_R3606
75.2
RHH5206_R3577
99.1
RHH5263_R3635
103.0
RHH5298_R3664
92.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
