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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
55.4
nTPM
Monaco:
11.2
nTPM
Schmiedel:
36.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
55.4
HPA sample
nTPM
gdT-cell nTPM: 33.4
Samples: 6
Max nTPM: 58.5
Min nTPM: 7.7
P10809_1007
58.5
P10809_1022
24.3
P10809_1041
39.6
P10809_1060
7.7
P10809_1077
37.8
P10809_1098
32.2
MAIT T-cell nTPM: 33.2
Samples: 6
Max nTPM: 70.7
Min nTPM: 7.8
P10809_1006
40.7
P10809_1024
7.8
P10809_1043
33.1
P10809_1062
15.1
P10809_1083
31.8
P10809_1097
70.7
Memory CD4 T-cell nTPM: 51.4
Samples: 6
Max nTPM: 78.1
Min nTPM: 12.0
P10809_1014
70.0
P10809_1026
75.0
P10809_1045
78.1
P10809_1064
58.2
P10809_1086
15.0
P10809_1113
12.0
Memory CD8 T-cell nTPM: 53.1
Samples: 5
Max nTPM: 88.2
Min nTPM: 33.8
P10809_1012
59.2
P10809_1027
33.8
P10809_1046
88.2
P10809_1065
44.9
P10809_1111
39.3
Naive CD4 T-cell nTPM: 55.4
Samples: 6
Max nTPM: 147.0
Min nTPM: 25.2
P10809_1015
41.6
P10809_1030
53.2
P10809_1049
147.0
P10809_1068
33.4
P10809_1085
31.8
P10809_1112
25.2
Naive CD8 T-cell nTPM: 40.1
Samples: 6
Max nTPM: 59.5
Min nTPM: 9.4
P10809_1016
34.0
P10809_1031
59.5
P10809_1050
35.3
P10809_1069
54.1
P10809_1087
9.4
P10809_1110
48.4
T-reg nTPM: 47.1
Samples: 6
Max nTPM: 141.4
Min nTPM: 16.7
P10809_1018
16.7
P10809_1037
34.6
P10809_1056
141.4
P10809_1075
38.5
P10809_1094
21.1
P10809_1106
30.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
11.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 9.1
Samples: 4
Max nTPM: 14.0
Min nTPM: 3.4
RHH5202_R3573
3.4
RHH5230_R3602
14.0
RHH5259_R3631
12.7
RHH5288_R3660
6.3
Effector memory CD8 T-cell nTPM: 8.4
Samples: 4
Max nTPM: 15.4
Min nTPM: 2.6
RHH5203_R3574
3.8
RHH5231_R3603
11.8
RHH5260_R3632
15.4
RHH5289_R3661
2.6
MAIT T-cell nTPM: 7.2
Samples: 4
Max nTPM: 12.9
Min nTPM: 4.3
RHH5233_R3605
5.2
RHH5205_R3576
4.3
RHH5262_R3634
12.9
RHH5297_R3663
6.4
Memory CD4 T-cell TFH nTPM: 9.5
Samples: 4
Max nTPM: 22.5
Min nTPM: 3.1
RHH5300_R3666
6.3
RHH5236_R3608
22.5
RHH5265_R3637
6.2
RHH5208_R3579
3.1
Memory CD4 T-cell Th1 nTPM: 10.4
Samples: 4
Max nTPM: 16.0
Min nTPM: 2.6
RHH5210_R3581
2.6
RHH5302_R3668
8.5
RHH5238_R3610
16.0
RHH5267_R3639
14.4
Memory CD4 T-cell Th1/Th17 nTPM: 8.4
Samples: 4
Max nTPM: 12.0
Min nTPM: 4.3
RHH5303_R3669
4.3
RHH5211_R3582
10.9
RHH5239_R3611
6.3
RHH5268_R3640
12.0
Memory CD4 T-cell Th17 nTPM: 8.1
Samples: 4
Max nTPM: 12.9
Min nTPM: 1.9
RHH5304_R3670
4.9
RHH5212_R3583
12.8
RHH5240_R3612
1.9
RHH5269_R3641
12.9
Memory CD4 T-cell Th2 nTPM: 9.9
Samples: 4
Max nTPM: 13.2
Min nTPM: 4.8
RHH5305_R3671
11.4
RHH5213_R3584
10.2
RHH5241_R3613
4.8
RHH5270_R3642
13.2
Naive CD4 T-cell nTPM: 8.7
Samples: 4
Max nTPM: 13.0
Min nTPM: 3.0
RHH5306_R3672
11.4
RHH5214_R3585
13.0
RHH5242_R3614
3.0
RHH5271_R3643
7.2
Naive CD8 T-cell nTPM: 7.9
Samples: 4
Max nTPM: 13.5
Min nTPM: 2.9
RHH5201_R3572
2.9
RHH5229_R3601
8.1
RHH5258_R3630
13.5
RHH5287_R3659
7.0
Non-Vd2 gdTCR nTPM: 8.3
Samples: 4
Max nTPM: 13.5
Min nTPM: 2.2
RHH5235_R3607
10.8
RHH5264_R3636
6.8
RHH5207_R3578
2.2
RHH5299_R3665
13.5
T-reg nTPM: 11.1
Samples: 4
Max nTPM: 12.9
Min nTPM: 10.2
RHH5301_R3667
10.4
RHH5237_R3609
10.8
RHH5266_R3638
10.2
RHH5209_R3580
12.9
Terminal effector memory CD4 T-cell nTPM: 8.0
Samples: 2
Max nTPM: 11.8
Min nTPM: 4.2
RHH5243_R3615
11.8
RHH5272_R3644
4.2
Terminal effector memory CD8 T-cell nTPM: 11.2
Samples: 4
Max nTPM: 20.9
Min nTPM: 4.6
RHH5232_R3604
4.6
RHH5204_R3575
13.2
RHH5261_R3633
20.9
RHH5296_R3662
6.2
Vd2 gdTCR nTPM: 8.2
Samples: 4
Max nTPM: 10.2
Min nTPM: 6.7
RHH5234_R3606
7.0
RHH5206_R3577
9.0
RHH5263_R3635
6.7
RHH5298_R3664
10.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
