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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
84.5
nTPM
Monaco:
163.9
nTPM
Schmiedel:
41.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
84.5
HPA sample
nTPM
gdT-cell nTPM: 68.4
Samples: 6
Max nTPM: 85.4
Min nTPM: 41.1
P10809_1007
41.1
P10809_1022
77.0
P10809_1041
80.6
P10809_1060
85.4
P10809_1077
58.6
P10809_1098
67.4
MAIT T-cell nTPM: 65.8
Samples: 6
Max nTPM: 85.0
Min nTPM: 47.4
P10809_1006
51.8
P10809_1024
77.1
P10809_1043
85.0
P10809_1062
58.4
P10809_1083
47.4
P10809_1097
75.0
Memory CD4 T-cell nTPM: 73.6
Samples: 6
Max nTPM: 95.1
Min nTPM: 45.9
P10809_1014
45.9
P10809_1026
86.9
P10809_1045
95.1
P10809_1064
74.3
P10809_1086
69.5
P10809_1113
69.6
Memory CD8 T-cell nTPM: 70.1
Samples: 5
Max nTPM: 81.0
Min nTPM: 60.3
P10809_1012
60.6
P10809_1027
60.3
P10809_1046
79.6
P10809_1065
69.2
P10809_1111
81.0
Naive CD4 T-cell nTPM: 71.9
Samples: 6
Max nTPM: 113.7
Min nTPM: 37.8
P10809_1015
37.8
P10809_1030
64.3
P10809_1049
113.7
P10809_1068
81.1
P10809_1085
64.1
P10809_1112
70.5
Naive CD8 T-cell nTPM: 70.5
Samples: 6
Max nTPM: 84.9
Min nTPM: 49.6
P10809_1016
49.6
P10809_1031
84.9
P10809_1050
70.4
P10809_1069
78.6
P10809_1087
70.4
P10809_1110
69.3
T-reg nTPM: 84.5
Samples: 6
Max nTPM: 125.0
Min nTPM: 62.5
P10809_1018
62.5
P10809_1037
75.9
P10809_1056
125.0
P10809_1075
78.3
P10809_1094
81.6
P10809_1106
83.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
163.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 139.5
Samples: 4
Max nTPM: 176.9
Min nTPM: 116.0
RHH5202_R3573
176.9
RHH5230_R3602
147.7
RHH5259_R3631
117.2
RHH5288_R3660
116.0
Effector memory CD8 T-cell nTPM: 152.1
Samples: 4
Max nTPM: 175.7
Min nTPM: 140.7
RHH5203_R3574
145.9
RHH5231_R3603
145.9
RHH5260_R3632
140.7
RHH5289_R3661
175.7
MAIT T-cell nTPM: 128.3
Samples: 4
Max nTPM: 154.7
Min nTPM: 108.6
RHH5233_R3605
108.6
RHH5205_R3576
154.7
RHH5262_R3634
135.7
RHH5297_R3663
114.1
Memory CD4 T-cell TFH nTPM: 163.9
Samples: 4
Max nTPM: 178.3
Min nTPM: 156.4
RHH5300_R3666
161.1
RHH5236_R3608
159.9
RHH5265_R3637
156.4
RHH5208_R3579
178.3
Memory CD4 T-cell Th1 nTPM: 121.3
Samples: 4
Max nTPM: 137.8
Min nTPM: 94.8
RHH5210_R3581
137.8
RHH5302_R3668
122.7
RHH5238_R3610
94.8
RHH5267_R3639
130.0
Memory CD4 T-cell Th1/Th17 nTPM: 134.4
Samples: 4
Max nTPM: 151.7
Min nTPM: 101.6
RHH5303_R3669
151.7
RHH5211_R3582
149.5
RHH5239_R3611
134.7
RHH5268_R3640
101.6
Memory CD4 T-cell Th17 nTPM: 142.4
Samples: 4
Max nTPM: 157.0
Min nTPM: 127.2
RHH5304_R3670
157.0
RHH5212_R3583
155.2
RHH5240_R3612
130.1
RHH5269_R3641
127.2
Memory CD4 T-cell Th2 nTPM: 137.2
Samples: 4
Max nTPM: 149.9
Min nTPM: 123.6
RHH5305_R3671
123.6
RHH5213_R3584
149.7
RHH5241_R3613
125.6
RHH5270_R3642
149.9
Naive CD4 T-cell nTPM: 135.2
Samples: 4
Max nTPM: 157.5
Min nTPM: 114.5
RHH5306_R3672
114.5
RHH5214_R3585
148.3
RHH5242_R3614
120.5
RHH5271_R3643
157.5
Naive CD8 T-cell nTPM: 123.6
Samples: 4
Max nTPM: 160.5
Min nTPM: 89.7
RHH5201_R3572
160.5
RHH5229_R3601
89.7
RHH5258_R3630
116.3
RHH5287_R3659
127.8
Non-Vd2 gdTCR nTPM: 150.2
Samples: 4
Max nTPM: 184.4
Min nTPM: 116.2
RHH5235_R3607
140.1
RHH5264_R3636
160.2
RHH5207_R3578
184.4
RHH5299_R3665
116.2
T-reg nTPM: 154.9
Samples: 4
Max nTPM: 190.5
Min nTPM: 113.0
RHH5301_R3667
113.0
RHH5237_R3609
190.5
RHH5266_R3638
145.5
RHH5209_R3580
170.5
Terminal effector memory CD4 T-cell nTPM: 146.9
Samples: 2
Max nTPM: 157.5
Min nTPM: 136.3
RHH5243_R3615
136.3
RHH5272_R3644
157.5
Terminal effector memory CD8 T-cell nTPM: 134.8
Samples: 4
Max nTPM: 147.7
Min nTPM: 114.0
RHH5232_R3604
147.7
RHH5204_R3575
114.0
RHH5261_R3633
135.5
RHH5296_R3662
142.0
Vd2 gdTCR nTPM: 142.6
Samples: 4
Max nTPM: 154.9
Min nTPM: 136.7
RHH5234_R3606
136.7
RHH5206_R3577
142.1
RHH5263_R3635
154.9
RHH5298_R3664
136.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
