We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
117.5
nTPM
Monaco:
327.3
nTPM
Schmiedel:
155.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
117.5
HPA sample
nTPM
gdT-cell nTPM: 72.9
Samples: 6
Max nTPM: 119.2
Min nTPM: 18.7
P10809_1007
119.2
P10809_1022
51.4
P10809_1041
89.3
P10809_1060
18.7
P10809_1077
72.8
P10809_1098
86.0
MAIT T-cell nTPM: 81.2
Samples: 6
Max nTPM: 143.7
Min nTPM: 24.3
P10809_1006
128.5
P10809_1024
25.2
P10809_1043
106.9
P10809_1062
24.3
P10809_1083
58.5
P10809_1097
143.7
Memory CD4 T-cell nTPM: 105.3
Samples: 6
Max nTPM: 166.9
Min nTPM: 21.9
P10809_1014
140.7
P10809_1026
155.9
P10809_1045
166.9
P10809_1064
113.4
P10809_1086
32.7
P10809_1113
21.9
Memory CD8 T-cell nTPM: 117.5
Samples: 5
Max nTPM: 191.8
Min nTPM: 46.6
P10809_1012
144.3
P10809_1027
46.6
P10809_1046
191.8
P10809_1065
98.0
P10809_1111
106.7
Naive CD4 T-cell nTPM: 111.4
Samples: 6
Max nTPM: 184.5
Min nTPM: 61.9
P10809_1015
118.1
P10809_1030
126.1
P10809_1049
184.5
P10809_1068
83.3
P10809_1085
94.2
P10809_1112
61.9
Naive CD8 T-cell nTPM: 105.3
Samples: 6
Max nTPM: 134.7
Min nTPM: 20.3
P10809_1016
105.3
P10809_1031
134.7
P10809_1050
125.5
P10809_1069
123.5
P10809_1087
20.3
P10809_1110
122.7
T-reg nTPM: 84.3
Samples: 6
Max nTPM: 178.0
Min nTPM: 24.6
P10809_1018
43.5
P10809_1037
100.9
P10809_1056
178.0
P10809_1075
88.6
P10809_1094
24.6
P10809_1106
70.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
327.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 212.2
Samples: 4
Max nTPM: 405.9
Min nTPM: 61.5
RHH5202_R3573
61.5
RHH5230_R3602
405.9
RHH5259_R3631
231.9
RHH5288_R3660
149.5
Effector memory CD8 T-cell nTPM: 191.0
Samples: 4
Max nTPM: 308.7
Min nTPM: 51.5
RHH5203_R3574
136.4
RHH5231_R3603
267.4
RHH5260_R3632
308.7
RHH5289_R3661
51.5
MAIT T-cell nTPM: 208.8
Samples: 4
Max nTPM: 396.8
Min nTPM: 119.7
RHH5233_R3605
127.6
RHH5205_R3576
191.0
RHH5262_R3634
396.8
RHH5297_R3663
119.7
Memory CD4 T-cell TFH nTPM: 193.4
Samples: 4
Max nTPM: 306.6
Min nTPM: 13.4
RHH5300_R3666
306.6
RHH5236_R3608
304.2
RHH5265_R3637
149.2
RHH5208_R3579
13.4
Memory CD4 T-cell Th1 nTPM: 196.5
Samples: 4
Max nTPM: 329.6
Min nTPM: 106.4
RHH5210_R3581
133.5
RHH5302_R3668
106.4
RHH5238_R3610
216.3
RHH5267_R3639
329.6
Memory CD4 T-cell Th1/Th17 nTPM: 193.7
Samples: 4
Max nTPM: 282.0
Min nTPM: 52.5
RHH5303_R3669
52.5
RHH5211_R3582
282.0
RHH5239_R3611
159.2
RHH5268_R3640
280.9
Memory CD4 T-cell Th17 nTPM: 185.3
Samples: 4
Max nTPM: 311.3
Min nTPM: 72.7
RHH5304_R3670
72.7
RHH5212_R3583
311.3
RHH5240_R3612
75.9
RHH5269_R3641
281.3
Memory CD4 T-cell Th2 nTPM: 241.7
Samples: 4
Max nTPM: 326.8
Min nTPM: 90.3
RHH5305_R3671
224.7
RHH5213_R3584
326.8
RHH5241_R3613
90.3
RHH5270_R3642
324.9
Naive CD4 T-cell nTPM: 279.8
Samples: 4
Max nTPM: 376.5
Min nTPM: 152.5
RHH5306_R3672
376.5
RHH5214_R3585
350.0
RHH5242_R3614
152.5
RHH5271_R3643
240.2
Naive CD8 T-cell nTPM: 179.3
Samples: 4
Max nTPM: 287.7
Min nTPM: 18.1
RHH5201_R3572
18.1
RHH5229_R3601
139.4
RHH5258_R3630
287.7
RHH5287_R3659
271.8
Non-Vd2 gdTCR nTPM: 276.8
Samples: 4
Max nTPM: 473.2
Min nTPM: 93.4
RHH5235_R3607
473.2
RHH5264_R3636
141.7
RHH5207_R3578
93.4
RHH5299_R3665
398.9
T-reg nTPM: 327.4
Samples: 4
Max nTPM: 399.1
Min nTPM: 290.3
RHH5301_R3667
290.3
RHH5237_R3609
399.1
RHH5266_R3638
317.8
RHH5209_R3580
302.2
Terminal effector memory CD4 T-cell nTPM: 215.1
Samples: 2
Max nTPM: 288.6
Min nTPM: 141.6
RHH5243_R3615
288.6
RHH5272_R3644
141.6
Terminal effector memory CD8 T-cell nTPM: 184.3
Samples: 4
Max nTPM: 324.3
Min nTPM: 76.1
RHH5232_R3604
143.5
RHH5204_R3575
193.3
RHH5261_R3633
324.3
RHH5296_R3662
76.1
Vd2 gdTCR nTPM: 242.7
Samples: 4
Max nTPM: 271.5
Min nTPM: 175.0
RHH5234_R3606
253.4
RHH5206_R3577
175.0
RHH5263_R3635
270.8
RHH5298_R3664
271.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
