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                                  • MAF1
                                  TISSUE PRIMARY DATA AMYGDALA Show tissue menu
                                  ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
                                  ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
                                  ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
                                  SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
                                  ANTIBODIES
                                  AND
                                  VALIDATION
                                  Dictionary
                                  Tissue proteome
                                  Amygdala
                                  AMYGDALA - Expression summary
                                  Protein expressioni

                                  On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

                                  Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

                                  If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                  No data
                                  RNA expressioni

                                  A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

                                  The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

                                  Scroll down to view mRNA expression data in more detail.
                                  Consensus:59.4 nTPM
                                  HPA Brain:68.3 nTPM
                                  GTEx:59.4 nTPM
                                  FANTOM5:59.0 Scaled Tags Per Million
                                  Pig:33.4 nTPM
                                  Mouse:66.1 nTPM
                                  Allen mouse:7.9 Expression energy

                                  AMYGDALA - HPA Brain RNA-seq
                                  Max nTPM 68.3
                                  Sample id Sample description nTPM
                                  Amygdala
                                  nTPM: 68.3
                                  2695 Female, age 67, right hemisphere 73.9
                                  2514 Male, age 75, right hemisphere 71.7
                                  2814 Male, age 76, right hemisphere 70.0
                                  2517 Female, age 94, left hemisphere 65.4
                                  1987 Female, age 91, left hemisphere 60.7
                                  Basal amygdala
                                  nTPM: 63.6
                                  2609 Male, age 75, right hemisphere 72.0
                                  2827 Female, age 67, right hemisphere 68.5
                                  2685 Female, age 94, left hemisphere 62.6
                                  2243 Female, age 91, right hemisphere 61.5
                                  2110 Male, age 80, left hemisphere 59.2
                                  1955 Male, age 76, both hemispheres 57.9
                                  Central amygdala
                                  nTPM: 65.2
                                  2826 Female, age 94, left hemisphere 79.3
                                  2515 Male, age 75, right hemisphere 70.0
                                  2239 Male, age 80, left hemisphere 61.1
                                  1905 Male, age 76, both hemispheres 59.1
                                  2701 Female, age 91, right hemisphere 56.7
                                  Corticomedial amygdala
                                  nTPM: 57.9
                                  2428 Male, age 75, right hemisphere 65.8
                                  2535 Female, age 67, right hemisphere 63.8
                                  2829 Male, age 80, left hemisphere 58.5
                                  2242 Female, age 91, right hemisphere 56.3
                                  2429 Female, age 94, left hemisphere 52.2
                                  2240 Male, age 76, both hemispheres 50.5
                                  Lateral amygdala
                                  nTPM: 67.1
                                  2830 Female, age 67, right hemisphere 73.1
                                  2534 Female, age 94, left hemisphere 72.3
                                  2516 Male, age 75, right hemisphere 70.0
                                  2255 Female, age 91, right hemisphere 65.4
                                  2256 Male, age 80, left hemisphere 65.2
                                  1883 Male, age 76, both hemispheres 56.6

                                  AMYGDALA - GTEx RNA-seqi

                                  RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

                                  Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 59.4
                                  GTEx sample id Sample description nTPM
                                  50.758.566.530.087.20102030405060708090
                                  50.758.566.530.087.20102030405060708090
                                  Brain - Amygdala
                                  Average nTPM: 59.4
                                  Samples: 152

                                  Max nTPM: 99.4
                                  Min nTPM: 30.0
                                  Std nTPM: 11.2
                                  Median nTPM: 58.6
                                  GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 99.4
                                  GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 91.6
                                  GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 87.2
                                  GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 85.5
                                  GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 81.8
                                  GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 81.4
                                  GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 79.5
                                  GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 79.5
                                  GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 79.3
                                  GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 79.1
                                  GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 78.5
                                  GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 74.7
                                  GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 74.2
                                  GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 74.2
                                  GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 73.9
                                  GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 73.7
                                  GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 73.1
                                  GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 72.7
                                  GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 72.6
                                  GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 71.9
                                  GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 71.3
                                  GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 70.7
                                  GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 70.0
                                  GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 69.9
                                  GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 69.6
                                  GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 69.6
                                  GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 69.6
                                  GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 69.5
                                  GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 68.7
                                  GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 68.6
                                  GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 68.1
                                  GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 67.4
                                  GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 67.4
                                  GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 67.4
                                  GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 67.3
                                  GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 67.0
                                  GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 66.8
                                  GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 66.6
                                  GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 66.4
                                  GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 66.4
                                  GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 66.1
                                  GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 65.8
                                  GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 65.7
                                  GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 65.3
                                  GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 64.9
                                  GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 64.8
                                  GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 64.7
                                  GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 64.7
                                  GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 64.3
                                  GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 63.8
                                  GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 63.8
                                  GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 63.6
                                  GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 63.4
                                  GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 63.3
                                  GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 62.8
                                  GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 62.7
                                  GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 62.4
                                  GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 62.2
                                  GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 62.0
                                  GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 61.6
                                  GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 61.0
                                  GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 60.9
                                  GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 60.6
                                  GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 60.4
                                  GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 60.4
                                  GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 60.0
                                  GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 59.8
                                  GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 59.7
                                  GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 59.5
                                  GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 59.5
                                  GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 59.4
                                  GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 59.4
                                  GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 59.3
                                  GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 58.8
                                  GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 58.7
                                  GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 58.7
                                  GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 58.4
                                  GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 58.1
                                  GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 58.1
                                  GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 58.1
                                  GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 58.0
                                  GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 57.8
                                  GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 57.7
                                  GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 57.3
                                  GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 57.3
                                  GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 57.1
                                  GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 56.9
                                  GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 56.9
                                  GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 56.6
                                  GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 56.6
                                  GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 56.5
                                  GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 56.4
                                  GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 56.1
                                  GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 56.0
                                  GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 55.6
                                  GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 55.6
                                  GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 55.6
                                  GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 55.4
                                  GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 54.6
                                  GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 54.5
                                  GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 54.5
                                  GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 54.2
                                  GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 53.9
                                  GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 53.7
                                  GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 53.7
                                  GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 53.2
                                  GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 53.0
                                  GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 52.9
                                  GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 52.8
                                  GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 52.7
                                  GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 52.5
                                  GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 51.9
                                  GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 51.2
                                  GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 50.8
                                  GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 50.5
                                  GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 50.3
                                  GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 50.2
                                  GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 50.0
                                  GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 49.9
                                  GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 49.3
                                  GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 49.3
                                  GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 49.2
                                  GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 49.1
                                  GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 49.0
                                  GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 48.8
                                  GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 48.6
                                  GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 48.6
                                  GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 48.1
                                  GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 48.0
                                  GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 47.8
                                  GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 47.7
                                  GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 46.9
                                  GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 46.8
                                  GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 46.4
                                  GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 46.4
                                  GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 46.3
                                  GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 46.2
                                  GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 46.0
                                  GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 45.7
                                  GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 45.5
                                  GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 45.5
                                  GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 44.8
                                  GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 44.5
                                  GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 44.3
                                  GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 44.0
                                  GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 43.9
                                  GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 41.5
                                  GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 41.1
                                  GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 39.2
                                  GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 38.9
                                  GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 37.7
                                  GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 30.0
                                  Show allShow less

                                  AMYGDALA - FANTOM5 CAGEi

                                  RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

                                  Max Scaled Tags Per Million 59.0
                                  FANTOM5 sample id Sample description Scaled Tags Per Million
                                  Amygdala
                                  Scaled Tags Per Million: 59.0
                                  FF:10151-102I7 76 years, female 59.0

                                  AMYGDALA - Pig RNA-seqi

                                  RNA-seq data obtained from pig brain is reported as nTPM .

                                  Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 33.4
                                  Pig sample Sample description nTPM
                                  30.132.135.428.540.90510152025303540
                                  30.132.135.428.540.90510152025303540
                                  Amygdala
                                  nTPM: 33.4
                                  Samples: 4

                                  Max nTPM: 40.9
                                  Min nTPM: 28.5
                                  Sample A Female 40.9
                                  Sample B Female 30.6
                                  Sample C Male 33.6
                                  Sample D Male 28.5

                                  AMYGDALA - Mouse RNA-seqi

                                  RNA-seq data obtained from mouse brain is reported as nTPM .

                                  Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 66.1
                                  Mouse sample Sample description nTPM
                                  64.866.367.663.468.305101520253035404550556065
                                  64.866.367.663.468.305101520253035404550556065
                                  Amygdala
                                  nTPM: 66.1
                                  Samples: 4

                                  Max nTPM: 68.3
                                  Min nTPM: 63.4
                                  Sample A Male 65.2
                                  Sample B Male 68.3
                                  Sample C Female 67.4
                                  Sample D Female 63.4

                                  AMYGDALA - Allen Mouse ISHi

                                  In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

                                  Max Expression energy 7.9
                                  Allen experiment id Experiment description Expression energy
                                  Cortical subplate
                                  Expression energy: 7.9
                                  69080508 Antisense, RP_050324_02_B09, Mouse strain C57BL/6J (56 days, male) 7.9

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