We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
89.1
nTPM
Monaco:
284.6
nTPM
Schmiedel:
208.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
89.1
HPA sample
nTPM
gdT-cell nTPM: 42.6
Samples: 6
Max nTPM: 59.2
Min nTPM: 30.5
P10809_1007
40.2
P10809_1022
44.0
P10809_1041
59.2
P10809_1060
45.9
P10809_1077
35.8
P10809_1098
30.5
MAIT T-cell nTPM: 48.4
Samples: 6
Max nTPM: 61.6
Min nTPM: 40.2
P10809_1006
50.5
P10809_1024
61.6
P10809_1043
40.2
P10809_1062
44.8
P10809_1083
42.5
P10809_1097
50.5
Memory CD4 T-cell nTPM: 50.8
Samples: 6
Max nTPM: 60.1
Min nTPM: 46.2
P10809_1014
56.0
P10809_1026
60.1
P10809_1045
48.3
P10809_1064
47.8
P10809_1086
46.2
P10809_1113
46.6
Memory CD8 T-cell nTPM: 54.1
Samples: 5
Max nTPM: 66.3
Min nTPM: 41.1
P10809_1012
66.3
P10809_1027
60.6
P10809_1046
53.8
P10809_1065
41.1
P10809_1111
48.5
Naive CD4 T-cell nTPM: 89.1
Samples: 6
Max nTPM: 108.9
Min nTPM: 77.8
P10809_1015
90.1
P10809_1030
91.6
P10809_1049
82.8
P10809_1068
108.9
P10809_1085
83.1
P10809_1112
77.8
Naive CD8 T-cell nTPM: 83.7
Samples: 6
Max nTPM: 117.4
Min nTPM: 44.5
P10809_1016
113.6
P10809_1031
117.4
P10809_1050
71.7
P10809_1069
81.0
P10809_1087
44.5
P10809_1110
74.2
T-reg nTPM: 59.3
Samples: 6
Max nTPM: 66.7
Min nTPM: 49.8
P10809_1018
66.7
P10809_1037
50.5
P10809_1056
62.7
P10809_1075
49.8
P10809_1094
64.6
P10809_1106
61.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
284.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 112.6
Samples: 4
Max nTPM: 121.7
Min nTPM: 89.7
RHH5202_R3573
121.7
RHH5230_R3602
117.7
RHH5259_R3631
89.7
RHH5288_R3660
121.3
Effector memory CD8 T-cell nTPM: 92.1
Samples: 4
Max nTPM: 95.5
Min nTPM: 89.7
RHH5203_R3574
95.5
RHH5231_R3603
91.3
RHH5260_R3632
91.8
RHH5289_R3661
89.7
MAIT T-cell nTPM: 86.3
Samples: 4
Max nTPM: 124.0
Min nTPM: 57.0
RHH5233_R3605
124.0
RHH5205_R3576
57.0
RHH5262_R3634
85.3
RHH5297_R3663
78.9
Memory CD4 T-cell TFH nTPM: 137.7
Samples: 4
Max nTPM: 157.0
Min nTPM: 113.0
RHH5300_R3666
133.7
RHH5236_R3608
147.2
RHH5265_R3637
157.0
RHH5208_R3579
113.0
Memory CD4 T-cell Th1 nTPM: 127.5
Samples: 4
Max nTPM: 169.2
Min nTPM: 91.2
RHH5210_R3581
169.2
RHH5302_R3668
122.6
RHH5238_R3610
91.2
RHH5267_R3639
126.8
Memory CD4 T-cell Th1/Th17 nTPM: 105.7
Samples: 4
Max nTPM: 117.7
Min nTPM: 93.8
RHH5303_R3669
117.7
RHH5211_R3582
108.0
RHH5239_R3611
103.3
RHH5268_R3640
93.8
Memory CD4 T-cell Th17 nTPM: 102.0
Samples: 4
Max nTPM: 113.5
Min nTPM: 77.5
RHH5304_R3670
113.5
RHH5212_R3583
77.5
RHH5240_R3612
107.3
RHH5269_R3641
109.6
Memory CD4 T-cell Th2 nTPM: 103.6
Samples: 4
Max nTPM: 124.7
Min nTPM: 70.8
RHH5305_R3671
120.6
RHH5213_R3584
70.8
RHH5241_R3613
124.7
RHH5270_R3642
98.1
Naive CD4 T-cell nTPM: 225.0
Samples: 4
Max nTPM: 254.5
Min nTPM: 198.8
RHH5306_R3672
230.8
RHH5214_R3585
215.7
RHH5242_R3614
254.5
RHH5271_R3643
198.8
Naive CD8 T-cell nTPM: 284.6
Samples: 4
Max nTPM: 323.3
Min nTPM: 243.0
RHH5201_R3572
275.9
RHH5229_R3601
296.1
RHH5258_R3630
323.3
RHH5287_R3659
243.0
Non-Vd2 gdTCR nTPM: 68.5
Samples: 4
Max nTPM: 92.1
Min nTPM: 52.5
RHH5235_R3607
52.5
RHH5264_R3636
92.1
RHH5207_R3578
66.0
RHH5299_R3665
63.4
T-reg nTPM: 136.4
Samples: 4
Max nTPM: 153.0
Min nTPM: 127.2
RHH5301_R3667
132.1
RHH5237_R3609
127.2
RHH5266_R3638
133.3
RHH5209_R3580
153.0
Terminal effector memory CD4 T-cell nTPM: 86.7
Samples: 2
Max nTPM: 101.5
Min nTPM: 71.9
RHH5243_R3615
71.9
RHH5272_R3644
101.5
Terminal effector memory CD8 T-cell nTPM: 84.3
Samples: 4
Max nTPM: 110.7
Min nTPM: 70.5
RHH5232_R3604
70.5
RHH5204_R3575
76.5
RHH5261_R3633
79.4
RHH5296_R3662
110.7
Vd2 gdTCR nTPM: 80.7
Samples: 4
Max nTPM: 103.1
Min nTPM: 67.0
RHH5234_R3606
67.0
RHH5206_R3577
76.2
RHH5263_R3635
103.1
RHH5298_R3664
76.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
