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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
12.4
nTPM
Monaco:
18.1
nTPM
Schmiedel:
54.5
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
12.4
HPA sample
nTPM
gdT-cell nTPM: 11.3
Samples: 6
Max nTPM: 17.8
Min nTPM: 5.0
P10809_1007
5.0
P10809_1022
13.4
P10809_1041
11.7
P10809_1060
8.9
P10809_1077
10.8
P10809_1098
17.8
MAIT T-cell nTPM: 9.8
Samples: 6
Max nTPM: 16.9
Min nTPM: 4.1
P10809_1006
8.8
P10809_1024
13.9
P10809_1043
9.3
P10809_1062
5.9
P10809_1083
4.1
P10809_1097
16.9
Memory CD4 T-cell nTPM: 8.8
Samples: 6
Max nTPM: 12.9
Min nTPM: 5.5
P10809_1014
5.5
P10809_1026
11.3
P10809_1045
9.3
P10809_1064
7.9
P10809_1086
5.7
P10809_1113
12.9
Memory CD8 T-cell nTPM: 9.1
Samples: 5
Max nTPM: 16.3
Min nTPM: 5.3
P10809_1012
6.4
P10809_1027
10.2
P10809_1046
7.2
P10809_1065
5.3
P10809_1111
16.3
Naive CD4 T-cell nTPM: 11.1
Samples: 6
Max nTPM: 16.0
Min nTPM: 5.9
P10809_1015
5.9
P10809_1030
14.2
P10809_1049
14.8
P10809_1068
8.2
P10809_1085
7.4
P10809_1112
16.0
Naive CD8 T-cell nTPM: 10.2
Samples: 6
Max nTPM: 17.6
Min nTPM: 5.4
P10809_1016
5.4
P10809_1031
17.6
P10809_1050
10.1
P10809_1069
8.9
P10809_1087
6.4
P10809_1110
13.0
T-reg nTPM: 12.4
Samples: 6
Max nTPM: 24.1
Min nTPM: 6.5
P10809_1018
6.5
P10809_1037
16.4
P10809_1056
6.5
P10809_1075
9.0
P10809_1094
12.1
P10809_1106
24.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
18.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 11.9
Samples: 4
Max nTPM: 14.6
Min nTPM: 8.6
RHH5202_R3573
13.9
RHH5230_R3602
14.6
RHH5259_R3631
10.4
RHH5288_R3660
8.6
Effector memory CD8 T-cell nTPM: 15.9
Samples: 4
Max nTPM: 25.5
Min nTPM: 8.8
RHH5203_R3574
25.5
RHH5231_R3603
17.8
RHH5260_R3632
8.8
RHH5289_R3661
11.3
MAIT T-cell nTPM: 16.2
Samples: 4
Max nTPM: 32.0
Min nTPM: 8.6
RHH5233_R3605
8.6
RHH5205_R3576
32.0
RHH5262_R3634
13.3
RHH5297_R3663
10.7
Memory CD4 T-cell TFH nTPM: 11.0
Samples: 4
Max nTPM: 19.5
Min nTPM: 5.1
RHH5300_R3666
6.4
RHH5236_R3608
12.9
RHH5265_R3637
5.1
RHH5208_R3579
19.5
Memory CD4 T-cell Th1 nTPM: 12.7
Samples: 4
Max nTPM: 15.4
Min nTPM: 9.3
RHH5210_R3581
14.9
RHH5302_R3668
9.3
RHH5238_R3610
15.4
RHH5267_R3639
11.3
Memory CD4 T-cell Th1/Th17 nTPM: 14.0
Samples: 4
Max nTPM: 18.2
Min nTPM: 10.2
RHH5303_R3669
10.2
RHH5211_R3582
18.2
RHH5239_R3611
13.3
RHH5268_R3640
14.2
Memory CD4 T-cell Th17 nTPM: 11.7
Samples: 4
Max nTPM: 19.5
Min nTPM: 6.4
RHH5304_R3670
6.4
RHH5212_R3583
19.5
RHH5240_R3612
13.5
RHH5269_R3641
7.3
Memory CD4 T-cell Th2 nTPM: 14.5
Samples: 4
Max nTPM: 22.9
Min nTPM: 6.7
RHH5305_R3671
6.7
RHH5213_R3584
22.9
RHH5241_R3613
15.7
RHH5270_R3642
12.5
Naive CD4 T-cell nTPM: 10.8
Samples: 4
Max nTPM: 13.4
Min nTPM: 6.0
RHH5306_R3672
13.4
RHH5214_R3585
12.2
RHH5242_R3614
11.6
RHH5271_R3643
6.0
Naive CD8 T-cell nTPM: 16.6
Samples: 4
Max nTPM: 23.5
Min nTPM: 10.4
RHH5201_R3572
23.5
RHH5229_R3601
20.7
RHH5258_R3630
11.8
RHH5287_R3659
10.4
Non-Vd2 gdTCR nTPM: 13.9
Samples: 4
Max nTPM: 21.3
Min nTPM: 8.7
RHH5235_R3607
15.2
RHH5264_R3636
10.5
RHH5207_R3578
21.3
RHH5299_R3665
8.7
T-reg nTPM: 13.2
Samples: 4
Max nTPM: 18.5
Min nTPM: 9.6
RHH5301_R3667
9.6
RHH5237_R3609
14.5
RHH5266_R3638
10.0
RHH5209_R3580
18.5
Terminal effector memory CD4 T-cell nTPM: 18.1
Samples: 2
Max nTPM: 28.2
Min nTPM: 7.9
RHH5243_R3615
28.2
RHH5272_R3644
7.9
Terminal effector memory CD8 T-cell nTPM: 14.7
Samples: 4
Max nTPM: 24.6
Min nTPM: 7.3
RHH5232_R3604
15.4
RHH5204_R3575
24.6
RHH5261_R3633
7.3
RHH5296_R3662
11.5
Vd2 gdTCR nTPM: 13.7
Samples: 4
Max nTPM: 23.7
Min nTPM: 8.1
RHH5234_R3606
14.4
RHH5206_R3577
23.7
RHH5263_R3635
8.1
RHH5298_R3664
8.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
