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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
44.8
nTPM
HPA Brain:
192.8
nTPM
GTEx:
44.8
nTPM
FANTOM5:
103.7
Scaled Tags Per Million
Pig:
81.7
nTPM
Mouse:
201.5
nTPM
Allen mouse:
10.2
Expression energy
MIDBRAIN - Annotated protein expression
Pending normal tissue analysis
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
192.8
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 154.7
2666
Male, age 74, left hemisphere
215.2
2219
Male, age 76, both hemispheres
178.3
2019
Male, age 18, unknown
175.2
2586
Male, age 75, left hemisphere
173.5
2828
Female, age 72, unknown
163.7
1827
Male, age 72, unknown
160.5
1833
Male, age 53, unknown
126.8
1830
Male, age 51, unknown
124.5
2411
Female, age 72, unknown
115.0
1870
Female, age 42, unknown
114.5
Dorsal raphe nucleus nTPM: 134.1
2298
Female, age 72, unknown
153.7
1828
Male, age 53, unknown
148.3
2047
Male, age 72, unknown
144.1
2750
Male, age 76, both hemispheres
135.8
2016
Female, age 72, unknown
88.5
Inferior colliculus nTPM: 113.0
2849
Male, age 72, unknown
132.0
1848
Female, age 42, unknown
116.7
2097
Female, age 72, unknown
103.7
1890
Male, age 53, unknown
99.5
Median raphe nucleus nTPM: 172.1
2220
Male, age 76, midline
172.1
Periaquaductal grey, anterior nTPM: 171.9
1947
Male, age 18, unknown
190.1
1795
Male, age 51, unknown
171.3
2502
Female, age 75, unknown
154.3
Periaquaductal grey, dorsal nTPM: 113.5
1831
Male, age 72, unknown
134.1
2850
Male, age 76, both hemispheres
113.5
1840
Male, age 53, unknown
106.0
2464
Female, age 72, unknown
100.3
Periaquaductal grey, lateral nTPM: 98.2
2053
Male, age 18, unknown
99.2
2272
Male, age 74, both hemispheres
98.9
2140
Male, age 76, both hemispheres
96.4
Pretectal area nTPM: 192.8
2007
Male, age 72, unknown
284.3
1817
Female, age 42, unknown
282.0
1816
Male, age 51, unknown
271.7
1944
Female, age 72, unknown
258.6
1815
Male, age 53, unknown
226.0
2667
Female, age 75, unknown
200.2
2224
Female, age 72, unknown
139.2
2407
Male, age 75, both hemispheres
136.5
2825
Male, age 18, unknown
127.6
2273
Male, age 74, both hemispheres
98.0
2316
Male, age 76, right hemisphere
96.5
Red nucleus nTPM: 119.8
2785
Male, age 18, unknown
172.9
2588
Male, age 74, left hemisphere
142.0
2725
Female, age 75, unknown
127.8
2823
Male, age 76, right hemisphere
127.1
1821
Female, age 72, unknown
124.1
2584
Male, age 75, left hemisphere
123.6
1954
Female, age 42, unknown
112.8
1865
Male, age 51, unknown
109.3
2769
Male, age 72, unknown
104.9
2503
Female, age 72, unknown
100.0
2227
Male, age 72, unknown
98.9
1904
Male, age 53, unknown
94.0
Substantia nigra nTPM: 150.0
1889
Female, age 72, unknown
226.0
2665
Male, age 74, both hemispheres
206.6
1941
Male, age 53, unknown
199.4
1916
Female, age 42, unknown
175.6
1851
Male, age 51, unknown
150.2
2590
Female, age 75, unknown
120.2
2583
Male, age 75, right hemisphere
118.3
2699
Male, age 18, unknown
104.6
2409
Female, age 72, unknown
102.9
2241
Male, age 72, unknown
95.8
Superior colliculus nTPM: 149.6
2087
Female, age 72, unknown
204.7
2664
Male, age 75, both hemispheres
194.8
2668
Female, age 75, unknown
160.2
1796
Male, age 53, unknown
151.9
2261
Male, age 18, unknown
148.3
1839
Male, age 51, unknown
143.0
1913
Female, age 42, unknown
128.6
1895
Male, age 76, right hemisphere
127.1
2587
Male, age 74, left hemisphere
123.2
1995
Male, age 72, unknown
114.2
Ventral tegmental area nTPM: 141.0
2218
Male, age 76, both hemispheres
190.2
2410
Female, age 72, unknown
168.4
1915
Female, age 42, unknown
133.9
2021
Male, age 53, unknown
121.3
1942
Male, age 51, unknown
117.0
2223
Female, age 72, unknown
115.2
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
44.8
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 44.8
Samples: 139
Max nTPM: 144.2
Min nTPM: 15.3
Std nTPM: 20.4
Median nTPM: 41.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
144.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
140.9
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
87.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
83.6
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
83.6
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
78.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
76.8
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
76.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
75.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
73.6
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
71.9
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
70.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
68.9
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
68.3
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
68.1
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
67.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
67.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
66.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
65.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
65.3
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
64.8
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
64.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
64.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
62.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
62.4
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
61.2
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
60.2
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
59.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
59.2
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
59.0
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
58.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
58.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
56.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
56.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
56.5
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
55.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
55.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
55.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
55.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
54.4
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
54.2
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
53.4
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
51.8
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
51.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
51.4
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
50.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
50.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
50.0
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
49.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
48.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
47.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
47.5
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
47.0
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
47.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
46.4
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
46.2
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
46.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
46.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
44.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
43.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
43.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
43.6
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
43.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
43.2
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
42.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
41.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
41.7
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
41.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
41.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
41.0
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
40.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
40.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
40.3
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
40.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
39.8
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
39.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
39.0
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
38.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
38.7
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
38.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
38.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
37.4
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
37.3
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
36.5
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
36.5
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
36.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
36.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
35.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
35.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
34.9
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
34.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
33.1
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
33.1
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
32.9
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
32.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
31.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
31.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
31.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
31.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
31.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
30.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
30.3
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
30.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
29.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
29.7
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
29.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
28.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
28.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
28.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
28.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
27.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
27.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
27.2
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
26.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
26.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
26.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
26.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
26.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
25.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
24.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
24.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
24.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
24.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
23.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
23.4
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
23.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
23.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
22.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
22.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
22.1
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
22.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
21.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
20.7
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
20.3
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
20.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
20.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
19.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
15.6
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
15.3
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
201.5
Mouse sample
Sample description
nTPM
Midbrain nTPM: 201.5
Samples: 4
Max nTPM: 220.5
Min nTPM: 186.7
Sample A
Male
186.7
Sample B
Male
194.2
Sample C
Female
220.5
Sample D
Female
204.6
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.