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                                  TISSUE PRIMARY DATA AMYGDALA Show tissue menu
                                  ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
                                  ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
                                  ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
                                  SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
                                  ANTIBODIES
                                  AND
                                  VALIDATION
                                  Dictionary
                                  Tissue proteome
                                  Amygdala
                                  AMYGDALA - Expression summary
                                  Mouse brain, Intensity
                                  Amygdalai

                                  Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

                                  52.737
                                  RNA expressioni

                                  A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

                                  The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

                                  Scroll down to view mRNA expression data in more detail.
                                  Consensus:0.7 nTPM
                                  HPA Brain:1.5 nTPM
                                  GTEx:0.7 nTPM
                                  FANTOM5:0.0 Scaled Tags Per Million
                                  Pig:0.6 nTPM
                                  Mouse:3.4 nTPM
                                  Allen mouse:0.2 Expression energy

                                  AMYGDALA - Mouse brain profilei

                                  Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

                                  , antibody HPA013768
                                  Amygdala mean intensity 52.737
                                  intensityi

                                  Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

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                                  Nucleus of the lateral olfactory tract 24.608
                                  Basal medial amygdaloid nucleus 28.965
                                  Basal lateral amygdala* -
                                  Basal lateral amygdaloid nucleus 39.825
                                  Cortical amygdala 24.048
                                  Central amygdala 52.737
                                  Medial amygdaloid nucleus 17.085

                                  AMYGDALA - HPA Brain RNA-seq
                                  Max nTPM 1.5
                                  Sample id Sample description nTPM
                                  Amygdala
                                  nTPM: 0.2
                                  1987 Female, age 91, left hemisphere 0.8
                                  2514 Male, age 75, right hemisphere 0.1
                                  2517 Female, age 94, left hemisphere 0.1
                                  2695 Female, age 67, right hemisphere 0.0
                                  2814 Male, age 76, right hemisphere 0.0
                                  Basal amygdala
                                  nTPM: 1.5
                                  2110 Male, age 80, left hemisphere 8.2
                                  2243 Female, age 91, right hemisphere 0.3
                                  2685 Female, age 94, left hemisphere 0.2
                                  2827 Female, age 67, right hemisphere 0.2
                                  2609 Male, age 75, right hemisphere 0.1
                                  1955 Male, age 76, both hemispheres 0.0
                                  Central amygdala
                                  nTPM: 0.6
                                  2239 Male, age 80, left hemisphere 1.6
                                  2701 Female, age 91, right hemisphere 0.5
                                  2515 Male, age 75, right hemisphere 0.4
                                  2826 Female, age 94, left hemisphere 0.3
                                  1905 Male, age 76, both hemispheres 0.0
                                  Corticomedial amygdala
                                  nTPM: 0.4
                                  2535 Female, age 67, right hemisphere 0.8
                                  2429 Female, age 94, left hemisphere 0.6
                                  2829 Male, age 80, left hemisphere 0.6
                                  2240 Male, age 76, both hemispheres 0.2
                                  2242 Female, age 91, right hemisphere 0.1
                                  2428 Male, age 75, right hemisphere 0.0
                                  Lateral amygdala
                                  nTPM: 0.3
                                  2830 Female, age 67, right hemisphere 0.6
                                  2256 Male, age 80, left hemisphere 0.4
                                  2255 Female, age 91, right hemisphere 0.3
                                  2516 Male, age 75, right hemisphere 0.2
                                  1883 Male, age 76, both hemispheres 0.0
                                  2534 Female, age 94, left hemisphere 0.0

                                  AMYGDALA - GTEx RNA-seqi

                                  RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

                                  Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 0.7
                                  GTEx sample id Sample description nTPM
                                  0.20.50.90.01.90.00.51.01.52.02.53.03.54.04.55.05.56.06.5
                                  0.20.50.90.01.90.00.51.01.52.02.53.03.54.04.55.05.56.06.5
                                  Brain - Amygdala
                                  Average nTPM: 0.7
                                  Samples: 152

                                  Max nTPM: 6.5
                                  Min nTPM: 0.0
                                  Std nTPM: 0.8
                                  Median nTPM: 0.5
                                  GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 6.5
                                  GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 3.8
                                  GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 3.3
                                  GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 3.1
                                  GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 3.0
                                  GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 2.9
                                  GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 2.8
                                  GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 2.5
                                  GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 2.4
                                  GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 2.1
                                  GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 1.9
                                  GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 1.8
                                  GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 1.8
                                  GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 1.8
                                  GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 1.8
                                  GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 1.7
                                  GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 1.7
                                  GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 1.7
                                  GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 1.6
                                  GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 1.6
                                  GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 1.4
                                  GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 1.4
                                  GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 1.4
                                  GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 1.3
                                  GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 1.2
                                  GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 1.2
                                  GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 1.1
                                  GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 1.1
                                  GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 1.0
                                  GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 1.0
                                  GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 1.0
                                  GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 1.0
                                  GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 1.0
                                  GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 1.0
                                  GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 1.0
                                  GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 0.9
                                  GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 0.9
                                  GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 0.9
                                  GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 0.9
                                  GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 0.9
                                  GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 0.9
                                  GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 0.9
                                  GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 0.9
                                  GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 0.9
                                  GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 0.9
                                  GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 0.8
                                  GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 0.8
                                  GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 0.8
                                  GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 0.8
                                  GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 0.8
                                  GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 0.8
                                  GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 0.7
                                  GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 0.7
                                  GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 0.7
                                  GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 0.7
                                  GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 0.7
                                  GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 0.7
                                  GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 0.7
                                  GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 0.7
                                  GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 0.7
                                  GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 0.7
                                  GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 0.7
                                  GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 0.7
                                  GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 0.7
                                  GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 0.6
                                  GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 0.6
                                  GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 0.6
                                  GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 0.6
                                  GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 0.6
                                  GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 0.6
                                  GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 0.5
                                  GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 0.5
                                  GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 0.5
                                  GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 0.5
                                  GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 0.5
                                  GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 0.5
                                  GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 0.5
                                  GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 0.5
                                  GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 0.4
                                  GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 0.4
                                  GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 0.4
                                  GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 0.4
                                  GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 0.4
                                  GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 0.4
                                  GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 0.4
                                  GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 0.4
                                  GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 0.4
                                  GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 0.4
                                  GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 0.4
                                  GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 0.4
                                  GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 0.4
                                  GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 0.4
                                  GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 0.3
                                  GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 0.3
                                  GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 0.3
                                  GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 0.3
                                  GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 0.3
                                  GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 0.3
                                  GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 0.3
                                  GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 0.3
                                  GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 0.3
                                  GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 0.3
                                  GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 0.3
                                  GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 0.3
                                  GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 0.3
                                  GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 0.3
                                  GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 0.3
                                  GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 0.3
                                  GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 0.3
                                  GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 0.3
                                  GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 0.2
                                  GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 0.2
                                  GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 0.2
                                  GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 0.2
                                  GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 0.2
                                  GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 0.2
                                  GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 0.2
                                  GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 0.2
                                  GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 0.2
                                  GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 0.2
                                  GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 0.2
                                  GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 0.2
                                  GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 0.2
                                  GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 0.2
                                  GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 0.2
                                  GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 0.2
                                  GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 0.2
                                  GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 0.1
                                  GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 0.1
                                  GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 0.1
                                  GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 0.1
                                  GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 0.1
                                  GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 0.1
                                  GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 0.1
                                  GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 0.1
                                  GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 0.1
                                  GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 0.1
                                  GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 0.1
                                  GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 0.1
                                  GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 0.1
                                  GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 0.1
                                  GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 0.1
                                  GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 0.0
                                  GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 0.0
                                  GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 0.0
                                  GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 0.0
                                  GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 0.0
                                  GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 0.0
                                  GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 0.0
                                  GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 0.0
                                  GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 0.0
                                  GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 0.0
                                  Show allShow less

                                  AMYGDALA - FANTOM5 CAGEi

                                  RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

                                  Max Scaled Tags Per Million 0
                                  FANTOM5 sample id Sample description Scaled Tags Per Million
                                  Amygdala
                                  Scaled Tags Per Million: 0.0
                                  FF:10151-102I7 76 years, female 0.0

                                  AMYGDALA - Pig RNA-seqi

                                  RNA-seq data obtained from pig brain is reported as nTPM .

                                  Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 0.6
                                  Pig sample Sample description nTPM
                                  0.30.40.80.21.40.00.10.20.30.40.50.60.70.80.91.01.11.21.31.4
                                  0.30.40.80.21.40.00.10.20.30.40.50.60.70.80.91.01.11.21.31.4
                                  Amygdala
                                  nTPM: 0.6
                                  Samples: 4

                                  Max nTPM: 1.4
                                  Min nTPM: 0.2
                                  Sample A Female 1.4
                                  Sample B Female 0.6
                                  Sample C Male 0.2
                                  Sample D Male 0.3

                                  AMYGDALA - Mouse RNA-seqi

                                  RNA-seq data obtained from mouse brain is reported as nTPM .

                                  Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 3.4
                                  Mouse sample Sample description nTPM
                                  2.53.34.12.44.70.00.51.01.52.02.53.03.54.04.5
                                  2.53.34.12.44.70.00.51.01.52.02.53.03.54.04.5
                                  Amygdala
                                  nTPM: 3.4
                                  Samples: 4

                                  Max nTPM: 4.7
                                  Min nTPM: 2.4
                                  Sample A Male 3.9
                                  Sample B Male 2.4
                                  Sample C Female 4.7
                                  Sample D Female 2.6

                                  AMYGDALA - Allen Mouse ISHi

                                  In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

                                  Max Expression energy 0.2
                                  Allen experiment id Experiment description Expression energy
                                  Cortical subplate
                                  Expression energy: 0.2
                                  1056 Antisense, RP_Baylor_103073, Mouse strain C57BL/6J (56 days, male) 0.2
                                  1058 Antisense, RP_Baylor_103073, Mouse strain C57BL/6J (56 days, male) 0.2

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