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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
68.8
nTPM
Monaco:
674.2
nTPM
Schmiedel:
469.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.8
HPA sample
nTPM
gdT-cell nTPM: 45.7
Samples: 6
Max nTPM: 70.8
Min nTPM: 24.8
P10809_1007
70.8
P10809_1022
39.3
P10809_1041
38.8
P10809_1060
24.8
P10809_1077
33.0
P10809_1098
67.2
MAIT T-cell nTPM: 38.7
Samples: 6
Max nTPM: 84.7
Min nTPM: 11.6
P10809_1006
84.7
P10809_1024
11.6
P10809_1043
43.4
P10809_1062
27.2
P10809_1083
28.8
P10809_1097
36.7
Memory CD4 T-cell nTPM: 52.1
Samples: 6
Max nTPM: 100.5
Min nTPM: 25.2
P10809_1014
100.5
P10809_1026
61.4
P10809_1045
51.8
P10809_1064
38.2
P10809_1086
25.2
P10809_1113
35.6
Memory CD8 T-cell nTPM: 53.9
Samples: 5
Max nTPM: 103.6
Min nTPM: 22.3
P10809_1012
103.6
P10809_1027
22.3
P10809_1046
49.1
P10809_1065
32.0
P10809_1111
62.6
Naive CD4 T-cell nTPM: 68.8
Samples: 6
Max nTPM: 107.4
Min nTPM: 27.9
P10809_1015
107.4
P10809_1030
43.0
P10809_1049
27.9
P10809_1068
80.2
P10809_1085
52.1
P10809_1112
102.2
Naive CD8 T-cell nTPM: 53.5
Samples: 6
Max nTPM: 113.6
Min nTPM: 13.4
P10809_1016
113.6
P10809_1031
33.6
P10809_1050
45.7
P10809_1069
45.4
P10809_1087
13.4
P10809_1110
69.3
T-reg nTPM: 43.5
Samples: 6
Max nTPM: 89.0
Min nTPM: 28.2
P10809_1018
89.0
P10809_1037
35.2
P10809_1056
33.9
P10809_1075
29.4
P10809_1094
28.2
P10809_1106
45.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
674.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 431.2
Samples: 4
Max nTPM: 642.8
Min nTPM: 122.1
RHH5202_R3573
122.1
RHH5230_R3602
642.8
RHH5259_R3631
631.5
RHH5288_R3660
328.2
Effector memory CD8 T-cell nTPM: 366.9
Samples: 4
Max nTPM: 709.7
Min nTPM: 67.5
RHH5203_R3574
229.7
RHH5231_R3603
460.6
RHH5260_R3632
709.7
RHH5289_R3661
67.5
MAIT T-cell nTPM: 290.4
Samples: 4
Max nTPM: 373.5
Min nTPM: 178.0
RHH5233_R3605
178.0
RHH5205_R3576
373.5
RHH5262_R3634
342.9
RHH5297_R3663
267.0
Memory CD4 T-cell TFH nTPM: 419.5
Samples: 4
Max nTPM: 582.9
Min nTPM: 98.0
RHH5300_R3666
582.9
RHH5236_R3608
508.4
RHH5265_R3637
488.6
RHH5208_R3579
98.0
Memory CD4 T-cell Th1 nTPM: 516.2
Samples: 4
Max nTPM: 727.5
Min nTPM: 292.8
RHH5210_R3581
454.0
RHH5302_R3668
292.8
RHH5238_R3610
727.5
RHH5267_R3639
590.4
Memory CD4 T-cell Th1/Th17 nTPM: 444.7
Samples: 4
Max nTPM: 621.5
Min nTPM: 74.4
RHH5303_R3669
74.4
RHH5211_R3582
621.5
RHH5239_R3611
550.4
RHH5268_R3640
532.6
Memory CD4 T-cell Th17 nTPM: 456.8
Samples: 4
Max nTPM: 650.5
Min nTPM: 244.5
RHH5304_R3670
244.5
RHH5212_R3583
650.5
RHH5240_R3612
331.2
RHH5269_R3641
600.9
Memory CD4 T-cell Th2 nTPM: 489.0
Samples: 4
Max nTPM: 635.1
Min nTPM: 153.4
RHH5305_R3671
579.1
RHH5213_R3584
635.1
RHH5241_R3613
153.4
RHH5270_R3642
588.3
Naive CD4 T-cell nTPM: 674.2
Samples: 4
Max nTPM: 741.6
Min nTPM: 555.3
RHH5306_R3672
741.6
RHH5214_R3585
723.4
RHH5242_R3614
555.3
RHH5271_R3643
676.6
Naive CD8 T-cell nTPM: 538.2
Samples: 4
Max nTPM: 870.8
Min nTPM: 51.6
RHH5201_R3572
51.6
RHH5229_R3601
870.8
RHH5258_R3630
575.3
RHH5287_R3659
655.0
Non-Vd2 gdTCR nTPM: 290.4
Samples: 4
Max nTPM: 432.2
Min nTPM: 89.2
RHH5235_R3607
432.2
RHH5264_R3636
227.9
RHH5207_R3578
89.2
RHH5299_R3665
412.2
T-reg nTPM: 549.2
Samples: 4
Max nTPM: 629.3
Min nTPM: 507.8
RHH5301_R3667
507.8
RHH5237_R3609
532.1
RHH5266_R3638
527.5
RHH5209_R3580
629.3
Terminal effector memory CD4 T-cell nTPM: 420.3
Samples: 2
Max nTPM: 508.1
Min nTPM: 332.4
RHH5243_R3615
508.1
RHH5272_R3644
332.4
Terminal effector memory CD8 T-cell nTPM: 284.3
Samples: 4
Max nTPM: 499.6
Min nTPM: 84.8
RHH5232_R3604
260.9
RHH5204_R3575
292.0
RHH5261_R3633
499.6
RHH5296_R3662
84.8
Vd2 gdTCR nTPM: 389.9
Samples: 4
Max nTPM: 536.1
Min nTPM: 286.6
RHH5234_R3606
336.9
RHH5206_R3577
286.6
RHH5263_R3635
536.1
RHH5298_R3664
400.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
