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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
90.5
nTPM
Monaco:
74.6
nTPM
Schmiedel:
18.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
90.5
HPA sample
nTPM
gdT-cell nTPM: 10.4
Samples: 6
Max nTPM: 21.6
Min nTPM: 6.6
P10809_1007
6.6
P10809_1022
10.9
P10809_1041
6.6
P10809_1060
8.5
P10809_1077
8.3
P10809_1098
21.6
MAIT T-cell nTPM: 52.6
Samples: 6
Max nTPM: 78.5
Min nTPM: 21.9
P10809_1006
21.9
P10809_1024
48.7
P10809_1043
46.6
P10809_1062
63.1
P10809_1083
56.5
P10809_1097
78.5
Memory CD4 T-cell nTPM: 52.2
Samples: 6
Max nTPM: 86.9
Min nTPM: 34.1
P10809_1014
42.5
P10809_1026
66.4
P10809_1045
42.6
P10809_1064
40.8
P10809_1086
34.1
P10809_1113
86.9
Memory CD8 T-cell nTPM: 28.9
Samples: 5
Max nTPM: 44.0
Min nTPM: 19.5
P10809_1012
30.1
P10809_1027
23.8
P10809_1046
19.5
P10809_1065
27.2
P10809_1111
44.0
Naive CD4 T-cell nTPM: 0.9
Samples: 6
Max nTPM: 2.1
Min nTPM: 0.2
P10809_1015
0.5
P10809_1030
1.4
P10809_1049
0.2
P10809_1068
0.8
P10809_1085
2.1
P10809_1112
0.4
Naive CD8 T-cell nTPM: 4.3
Samples: 6
Max nTPM: 13.0
Min nTPM: 0.8
P10809_1016
1.9
P10809_1031
2.0
P10809_1050
1.7
P10809_1069
13.0
P10809_1087
0.8
P10809_1110
6.3
T-reg nTPM: 90.5
Samples: 6
Max nTPM: 120.7
Min nTPM: 56.7
P10809_1018
63.9
P10809_1037
56.7
P10809_1056
120.7
P10809_1075
93.7
P10809_1094
88.5
P10809_1106
119.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
74.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 23.2
Samples: 4
Max nTPM: 53.6
Min nTPM: 7.5
RHH5202_R3573
10.2
RHH5230_R3602
7.5
RHH5259_R3631
21.4
RHH5288_R3660
53.6
Effector memory CD8 T-cell nTPM: 20.2
Samples: 4
Max nTPM: 48.7
Min nTPM: 7.8
RHH5203_R3574
7.8
RHH5231_R3603
12.2
RHH5260_R3632
12.2
RHH5289_R3661
48.7
MAIT T-cell nTPM: 19.8
Samples: 4
Max nTPM: 30.1
Min nTPM: 12.4
RHH5233_R3605
12.4
RHH5205_R3576
30.1
RHH5262_R3634
23.6
RHH5297_R3663
13.1
Memory CD4 T-cell TFH nTPM: 15.6
Samples: 4
Max nTPM: 22.2
Min nTPM: 5.0
RHH5300_R3666
22.2
RHH5236_R3608
19.6
RHH5265_R3637
15.5
RHH5208_R3579
5.0
Memory CD4 T-cell Th1 nTPM: 20.2
Samples: 4
Max nTPM: 26.1
Min nTPM: 11.9
RHH5210_R3581
11.9
RHH5302_R3668
26.1
RHH5238_R3610
23.0
RHH5267_R3639
19.9
Memory CD4 T-cell Th1/Th17 nTPM: 40.6
Samples: 4
Max nTPM: 55.5
Min nTPM: 13.7
RHH5303_R3669
55.5
RHH5211_R3582
52.5
RHH5239_R3611
13.7
RHH5268_R3640
40.6
Memory CD4 T-cell Th17 nTPM: 74.6
Samples: 4
Max nTPM: 93.2
Min nTPM: 60.9
RHH5304_R3670
60.9
RHH5212_R3583
82.5
RHH5240_R3612
61.8
RHH5269_R3641
93.2
Memory CD4 T-cell Th2 nTPM: 40.9
Samples: 4
Max nTPM: 51.9
Min nTPM: 24.3
RHH5305_R3671
42.7
RHH5213_R3584
44.8
RHH5241_R3613
24.3
RHH5270_R3642
51.9
Naive CD4 T-cell nTPM: 1.1
Samples: 4
Max nTPM: 2.0
Min nTPM: 0.0
RHH5306_R3672
2.0
RHH5214_R3585
0.6
RHH5242_R3614
1.8
RHH5271_R3643
0.0
Naive CD8 T-cell nTPM: 3.5
Samples: 4
Max nTPM: 7.7
Min nTPM: 0.4
RHH5201_R3572
0.4
RHH5229_R3601
2.9
RHH5258_R3630
7.7
RHH5287_R3659
3.1
Non-Vd2 gdTCR nTPM: 10.4
Samples: 4
Max nTPM: 15.6
Min nTPM: 4.4
RHH5235_R3607
11.9
RHH5264_R3636
9.5
RHH5207_R3578
4.4
RHH5299_R3665
15.6
T-reg nTPM: 39.5
Samples: 4
Max nTPM: 57.7
Min nTPM: 17.5
RHH5301_R3667
41.3
RHH5237_R3609
57.7
RHH5266_R3638
41.4
RHH5209_R3580
17.5
Terminal effector memory CD4 T-cell nTPM: 0.9
Samples: 2
Max nTPM: 1.4
Min nTPM: 0.4
RHH5243_R3615
0.4
RHH5272_R3644
1.4
Terminal effector memory CD8 T-cell nTPM: 8.4
Samples: 4
Max nTPM: 16.4
Min nTPM: 1.1
RHH5232_R3604
7.8
RHH5204_R3575
1.1
RHH5261_R3633
8.4
RHH5296_R3662
16.4
Vd2 gdTCR nTPM: 8.6
Samples: 4
Max nTPM: 14.4
Min nTPM: 4.0
RHH5234_R3606
9.6
RHH5206_R3577
6.5
RHH5263_R3635
4.0
RHH5298_R3664
14.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
