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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
300.0
nTPM
Monaco:
524.5
nTPM
Schmiedel:
14.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
300.0
HPA sample
nTPM
gdT-cell nTPM: 300.0
Samples: 6
Max nTPM: 325.5
Min nTPM: 280.6
P10809_1007
283.5
P10809_1022
325.5
P10809_1041
287.8
P10809_1060
324.4
P10809_1077
280.6
P10809_1098
297.9
MAIT T-cell nTPM: 185.0
Samples: 6
Max nTPM: 209.8
Min nTPM: 168.2
P10809_1006
185.8
P10809_1024
209.8
P10809_1043
168.2
P10809_1062
205.7
P10809_1083
171.1
P10809_1097
169.3
Memory CD4 T-cell nTPM: 36.3
Samples: 6
Max nTPM: 108.8
Min nTPM: 2.8
P10809_1014
8.3
P10809_1026
3.5
P10809_1045
14.4
P10809_1064
108.8
P10809_1086
79.7
P10809_1113
2.8
Memory CD8 T-cell nTPM: 144.8
Samples: 5
Max nTPM: 223.0
Min nTPM: 93.8
P10809_1012
95.6
P10809_1027
148.4
P10809_1046
163.1
P10809_1065
223.0
P10809_1111
93.8
Naive CD4 T-cell nTPM: 10.9
Samples: 6
Max nTPM: 44.9
Min nTPM: 0.5
P10809_1015
3.0
P10809_1030
1.0
P10809_1049
4.3
P10809_1068
11.5
P10809_1085
44.9
P10809_1112
0.5
Naive CD8 T-cell nTPM: 109.3
Samples: 6
Max nTPM: 203.0
Min nTPM: 18.9
P10809_1016
18.9
P10809_1031
102.3
P10809_1050
89.9
P10809_1069
203.0
P10809_1087
196.3
P10809_1110
45.1
T-reg nTPM: 0.6
Samples: 6
Max nTPM: 2.0
Min nTPM: 0.2
P10809_1018
0.2
P10809_1037
0.2
P10809_1056
0.3
P10809_1075
0.4
P10809_1094
0.4
P10809_1106
2.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
524.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 16.6
Samples: 4
Max nTPM: 32.8
Min nTPM: 5.4
RHH5202_R3573
5.4
RHH5230_R3602
32.8
RHH5259_R3631
12.8
RHH5288_R3660
15.5
Effector memory CD8 T-cell nTPM: 238.8
Samples: 4
Max nTPM: 293.2
Min nTPM: 168.0
RHH5203_R3574
168.0
RHH5231_R3603
293.2
RHH5260_R3632
284.6
RHH5289_R3661
209.5
MAIT T-cell nTPM: 218.1
Samples: 4
Max nTPM: 251.5
Min nTPM: 191.4
RHH5233_R3605
191.4
RHH5205_R3576
216.5
RHH5262_R3634
251.5
RHH5297_R3663
213.1
Memory CD4 T-cell TFH nTPM: 4.4
Samples: 4
Max nTPM: 8.0
Min nTPM: 3.1
RHH5300_R3666
3.1
RHH5236_R3608
3.4
RHH5265_R3637
3.2
RHH5208_R3579
8.0
Memory CD4 T-cell Th1 nTPM: 12.2
Samples: 4
Max nTPM: 20.1
Min nTPM: 4.4
RHH5210_R3581
11.5
RHH5302_R3668
4.4
RHH5238_R3610
12.7
RHH5267_R3639
20.1
Memory CD4 T-cell Th1/Th17 nTPM: 29.9
Samples: 4
Max nTPM: 42.1
Min nTPM: 8.8
RHH5303_R3669
32.2
RHH5211_R3582
42.1
RHH5239_R3611
8.8
RHH5268_R3640
36.6
Memory CD4 T-cell Th17 nTPM: 26.5
Samples: 4
Max nTPM: 62.2
Min nTPM: 6.1
RHH5304_R3670
62.2
RHH5212_R3583
20.2
RHH5240_R3612
6.1
RHH5269_R3641
17.3
Memory CD4 T-cell Th2 nTPM: 5.6
Samples: 4
Max nTPM: 11.7
Min nTPM: 2.8
RHH5305_R3671
3.2
RHH5213_R3584
11.7
RHH5241_R3613
2.8
RHH5270_R3642
4.6
Naive CD4 T-cell nTPM: 9.6
Samples: 4
Max nTPM: 12.7
Min nTPM: 4.5
RHH5306_R3672
4.5
RHH5214_R3585
10.0
RHH5242_R3614
12.7
RHH5271_R3643
11.3
Naive CD8 T-cell nTPM: 1.6
Samples: 4
Max nTPM: 2.6
Min nTPM: 0.9
RHH5201_R3572
1.3
RHH5229_R3601
1.4
RHH5258_R3630
2.6
RHH5287_R3659
0.9
Non-Vd2 gdTCR nTPM: 524.5
Samples: 4
Max nTPM: 659.6
Min nTPM: 406.3
RHH5235_R3607
469.0
RHH5264_R3636
659.6
RHH5207_R3578
563.1
RHH5299_R3665
406.3
T-reg nTPM: 5.0
Samples: 4
Max nTPM: 6.7
Min nTPM: 1.7
RHH5301_R3667
5.4
RHH5237_R3609
1.7
RHH5266_R3638
6.3
RHH5209_R3580
6.7
Terminal effector memory CD4 T-cell nTPM: 347.2
Samples: 2
Max nTPM: 353.6
Min nTPM: 340.8
RHH5243_R3615
340.8
RHH5272_R3644
353.6
Terminal effector memory CD8 T-cell nTPM: 433.1
Samples: 4
Max nTPM: 560.4
Min nTPM: 350.3
RHH5232_R3604
399.3
RHH5204_R3575
422.3
RHH5261_R3633
560.4
RHH5296_R3662
350.3
Vd2 gdTCR nTPM: 254.5
Samples: 4
Max nTPM: 406.3
Min nTPM: 159.9
RHH5234_R3606
159.9
RHH5206_R3577
406.3
RHH5263_R3635
287.7
RHH5298_R3664
164.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
