We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
138.2
nTPM
FANTOM5:
91.0
Scaled Tags Per Million
Pig:
45.2
nTPM
Allen mouse:
2.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
138.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 135.7
2188
Female, age 91, both hemispheres
164.7
2090
Male, age 80, both hemispheres
153.3
2301
Female, age 85, both hemispheres
144.5
1984
Male, age 76, both hemispheres
80.2
Dorsal cochlear nucleus nTPM: 102.9
2187
Female, age 91, both hemispheres
141.8
2378
Male, age 80, both hemispheres
113.6
2802
Male, age 74, right hemisphere
103.6
2370
Male, age 61, both hemispheres
79.0
2058
Male, age 76, both hemispheres
76.9
Dorsal tegmental nucleus nTPM: 97.6
2083
Male, age 80, both hemispheres
132.9
2326
Male, age 74, both hemispheres
112.5
1936
Male, age 76, left hemisphere
86.3
2358
Male, age 61, both hemispheres
58.9
Dorsolateral tegmental area nTPM: 104.4
2751
Female, age 85, both hemispheres
163.1
2654
Male, age 80, both hemispheres
138.4
2337
Male, age 61, both hemispheres
91.7
2360
Male, age 74, both hemispheres
75.8
2141
Male, age 76, both hemispheres
52.9
Kolliker-Fuse nucleus nTPM: 117.5
2793
Female, age 91, left hemisphere
167.3
2163
Male, age 80, both hemispheres
108.7
2315
Male, age 76, right hemisphere
76.7
Lateral lemniscal nuclei nTPM: 117.9
2320
Female, age 91, left hemisphere
149.2
2036
Male, age 80, both hemispheres
130.6
2453
Male, age 74, right hemisphere
111.3
2746
Female, age 85, left hemisphere
101.2
2169
Male, age 76, both hemispheres
97.1
Lateral parabrachial nucleus nTPM: 113.1
2792
Male, age 76, both hemispheres
180.7
2013
Male, age 80, both hemispheres
112.5
2139
Female, age 85, right hemisphere
80.0
2790
Male, age 61, both hemispheres
79.2
Lateral vestibular nucleus nTPM: 98.2
2311
Male, age 80, both hemispheres
111.6
2184
Male, age 76, both hemispheres
84.9
Locus coeruleus nTPM: 68.5
2014
Male, age 55, unknown
86.2
2720
Male, age 74, both hemispheres
78.8
2162
Male, age 80, both hemispheres
75.3
2317
Female, age 72, unknown
68.4
2788
Male, age 74, unknown
59.2
2123
Female, age 91, both hemispheres
57.0
1980
Male, age 76, both hemispheres
54.3
Medial parabrachial nucleus nTPM: 116.7
2170
Female, age 91, both hemispheres
145.2
2463
Female, age 85, right hemisphere
134.3
2854
Male, age 80, both hemispheres
127.1
2786
Male, age 76, both hemispheres
99.1
2156
Male, age 61, both hemispheres
77.8
Medial periolivary nuclei nTPM: 117.4
2458
Female, age 91, both hemispheres
142.8
2081
Male, age 80, both hemispheres
138.3
2791
Male, age 74, right hemisphere
125.1
2063
Male, age 76, both hemispheres
97.5
2171
Female, age 85, both hemispheres
83.2
Motor facial nucleus nTPM: 108.3
2795
Female, age 91, both hemispheres
124.7
2697
Female, age 85, both hemispheres
123.5
2365
Male, age 74, right hemisphere
121.9
2126
Male, age 61, both hemispheres
101.1
2327
Male, age 80, both hemispheres
91.3
2062
Male, age 76, both hemispheres
87.4
Motor trigeminal nucleus nTPM: 110.7
2321
Female, age 91, both hemispheres
140.1
2560
Male, age 74, both hemispheres
128.1
2079
Male, age 80, both hemispheres
101.9
2309
Male, age 76, both hemispheres
101.1
2335
Male, age 61, both hemispheres
82.5
Nuclei of the trapezoid body nTPM: 105.4
2368
Female, age 91, both hemispheres
147.1
2166
Male, age 80, both hemispheres
128.8
1983
Male, age 76, both hemispheres
95.3
2159
Male, age 61, both hemispheres
78.8
2735
Female, age 85, both hemispheres
77.1
Nucleus raphe magnus nTPM: 101.8
2459
Female, age 91, both hemispheres
167.1
2051
Male, age 76, both hemispheres
114.6
2328
Male, age 80, both hemispheres
110.3
2455
Male, age 74, both hemispheres
101.1
2160
Male, age 61, both hemispheres
59.7
2172
Female, age 85, both hemispheres
58.2
Paramedian reticular nucleus nTPM: 118.7
2052
Male, age 76, both hemispheres
132.7
2050
Female, age 85, both hemispheres
124.7
2057
Male, age 80, both hemispheres
118.8
2313
Male, age 61, both hemispheres
98.7
Pedunculopontine tegmental nucleus nTPM: 94.0
2334
Male, age 80, both hemispheres
120.3
1921
Female, age 85, both hemispheres
82.9
2338
Male, age 61, both hemispheres
78.7
Pontine nuclei nTPM: 118.3
2454
Male, age 74, left hemisphere
184.3
2319
Female, age 91, both hemispheres
159.4
2109
Female, age 72, unknown
149.7
1968
Male, age 76, left hemisphere
111.7
2115
Male, age 80, left hemisphere
101.9
1863
Male, age 55, unknown
94.4
2727
Male, age 61, right hemisphere
78.7
2787
Female, age 85, both hemispheres
66.5
Pontine raphe nucleus nTPM: 78.8
2122
Female, age 85, midline
82.2
2853
Male, age 76, midline
75.5
Posteroventral cochlear nucleus nTPM: 128.8
2341
Male, age 80, both hemispheres
175.5
2135
Female, age 91, both hemispheres
163.0
2070
Male, age 76, both hemispheres
106.4
2752
Female, age 85, both hemispheres
99.8
2371
Male, age 61, both hemispheres
99.4
Principal sensory trigeminal nucleus nTPM: 104.1
2367
Female, age 91, left hemisphere
165.6
2008
Male, age 80, left hemisphere
103.0
2324
Male, age 76, both hemispheres
85.4
2158
Male, age 61, both hemispheres
62.4
Reticular pontine nucleus, caudal nTPM: 135.1
2457
Female, age 91, both hemispheres
168.6
2559
Male, age 74, both hemispheres
165.4
2092
Male, age 76, both hemispheres
115.9
2332
Male, age 80, right hemisphere
90.4
Reticular pontine nucleus, oral nTPM: 138.2
2361
Male, age 74, both hemispheres
162.3
2366
Female, age 91, both hemispheres
160.4
1939
Male, age 80, both hemispheres
136.0
2012
Female, age 85, both hemispheres
122.3
2167
Male, age 76, both hemispheres
110.0
Reticulotegmental nucleus nTPM: 103.2
2322
Female, age 91, both hemispheres
129.6
2452
Male, age 74, both hemispheres
108.5
2333
Male, age 80, both hemispheres
104.3
2325
Male, age 76, both hemispheres
70.4
Spinal trigeminal nucleus, oral nTPM: 95.8
2164
Male, age 80, both hemispheres
112.3
2737
Female, age 85, both hemispheres
88.0
1978
Male, age 76, both hemispheres
87.1
Subcoeruleus area nTPM: 112.5
2369
Female, age 85, left hemisphere
189.0
1958
Male, age 80, both hemispheres
114.2
2089
Male, age 76, left hemisphere
97.7
2451
Male, age 74, both hemispheres
89.4
2323
Female, age 91, left hemisphere
72.5
Superior olive nTPM: 127.3
2020
Male, age 76, both hemispheres
141.7
2364
Male, age 74, right hemisphere
128.6
2561
Female, age 91, both hemispheres
127.9
2329
Male, age 80, right hemisphere
124.5
1875
Female, age 85, both hemispheres
113.7
Ventral periolivary nuclei nTPM: 113.1
2023
Male, age 76, both hemispheres
165.4
2794
Female, age 91, left hemisphere
106.2
2165
Male, age 80, both hemispheres
100.3
2130
Female, age 85, both hemispheres
80.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 116.5
2456
Female, age 91, both hemispheres
158.8
2840
Female, age 85, both hemispheres
116.1
2161
Male, age 80, both hemispheres
110.5
1959
Male, age 76, both hemispheres
109.5
2449
Male, age 74, both hemispheres
107.2
2359
Male, age 61, both hemispheres
97.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
45.2
Pig sample
Sample description
nTPM
Pons nTPM: 45.3
Samples: 4
Max nTPM: 53.5
Min nTPM: 35.1
Sample A
Female
35.1
Sample B
Female
45.0
Sample C
Male
47.4
Sample D
Male
53.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
