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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
131.4
nTPM
Monaco:
262.9
nTPM
Schmiedel:
240.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
131.4
HPA sample
nTPM
gdT-cell nTPM: 49.1
Samples: 6
Max nTPM: 59.1
Min nTPM: 40.8
P10809_1007
40.8
P10809_1022
44.7
P10809_1041
59.1
P10809_1060
47.0
P10809_1077
52.9
P10809_1098
50.0
MAIT T-cell nTPM: 131.5
Samples: 6
Max nTPM: 157.9
Min nTPM: 108.2
P10809_1006
137.6
P10809_1024
125.4
P10809_1043
123.4
P10809_1062
136.2
P10809_1083
108.2
P10809_1097
157.9
Memory CD4 T-cell nTPM: 112.7
Samples: 6
Max nTPM: 140.1
Min nTPM: 85.0
P10809_1014
140.1
P10809_1026
93.1
P10809_1045
125.0
P10809_1064
85.0
P10809_1086
103.2
P10809_1113
129.6
Memory CD8 T-cell nTPM: 85.6
Samples: 5
Max nTPM: 100.5
Min nTPM: 71.6
P10809_1012
100.5
P10809_1027
78.7
P10809_1046
79.6
P10809_1065
71.6
P10809_1111
97.6
Naive CD4 T-cell nTPM: 123.1
Samples: 6
Max nTPM: 181.4
Min nTPM: 93.3
P10809_1015
181.4
P10809_1030
102.0
P10809_1049
116.8
P10809_1068
124.7
P10809_1085
93.3
P10809_1112
120.2
Naive CD8 T-cell nTPM: 107.2
Samples: 6
Max nTPM: 161.0
Min nTPM: 60.2
P10809_1016
161.0
P10809_1031
74.5
P10809_1050
113.5
P10809_1069
94.2
P10809_1087
60.2
P10809_1110
139.5
T-reg nTPM: 120.8
Samples: 6
Max nTPM: 143.8
Min nTPM: 92.8
P10809_1018
130.3
P10809_1037
100.7
P10809_1056
92.8
P10809_1075
134.5
P10809_1094
122.7
P10809_1106
143.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
262.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 201.9
Samples: 4
Max nTPM: 333.5
Min nTPM: 85.5
RHH5202_R3573
333.5
RHH5230_R3602
158.6
RHH5259_R3631
85.5
RHH5288_R3660
230.1
Effector memory CD8 T-cell nTPM: 147.7
Samples: 4
Max nTPM: 227.3
Min nTPM: 71.1
RHH5203_R3574
227.3
RHH5231_R3603
158.7
RHH5260_R3632
71.1
RHH5289_R3661
133.8
MAIT T-cell nTPM: 233.6
Samples: 4
Max nTPM: 248.7
Min nTPM: 220.4
RHH5233_R3605
248.7
RHH5205_R3576
236.5
RHH5262_R3634
220.4
RHH5297_R3663
228.8
Memory CD4 T-cell TFH nTPM: 214.6
Samples: 4
Max nTPM: 241.3
Min nTPM: 181.1
RHH5300_R3666
217.0
RHH5236_R3608
218.9
RHH5265_R3637
181.1
RHH5208_R3579
241.3
Memory CD4 T-cell Th1 nTPM: 199.3
Samples: 4
Max nTPM: 285.8
Min nTPM: 97.0
RHH5210_R3581
285.8
RHH5302_R3668
280.2
RHH5238_R3610
97.0
RHH5267_R3639
134.0
Memory CD4 T-cell Th1/Th17 nTPM: 262.9
Samples: 4
Max nTPM: 494.8
Min nTPM: 94.8
RHH5303_R3669
309.2
RHH5211_R3582
494.8
RHH5239_R3611
94.8
RHH5268_R3640
152.8
Memory CD4 T-cell Th17 nTPM: 201.7
Samples: 4
Max nTPM: 307.4
Min nTPM: 127.0
RHH5304_R3670
222.6
RHH5212_R3583
307.4
RHH5240_R3612
127.0
RHH5269_R3641
149.7
Memory CD4 T-cell Th2 nTPM: 229.9
Samples: 4
Max nTPM: 260.5
Min nTPM: 171.6
RHH5305_R3671
230.2
RHH5213_R3584
260.5
RHH5241_R3613
257.2
RHH5270_R3642
171.6
Naive CD4 T-cell nTPM: 244.4
Samples: 4
Max nTPM: 346.2
Min nTPM: 124.6
RHH5306_R3672
256.7
RHH5214_R3585
346.2
RHH5242_R3614
250.1
RHH5271_R3643
124.6
Naive CD8 T-cell nTPM: 258.3
Samples: 4
Max nTPM: 399.2
Min nTPM: 131.2
RHH5201_R3572
399.2
RHH5229_R3601
131.2
RHH5258_R3630
262.6
RHH5287_R3659
240.1
Non-Vd2 gdTCR nTPM: 111.0
Samples: 4
Max nTPM: 137.2
Min nTPM: 61.9
RHH5235_R3607
61.9
RHH5264_R3636
135.3
RHH5207_R3578
137.2
RHH5299_R3665
109.4
T-reg nTPM: 177.6
Samples: 4
Max nTPM: 221.9
Min nTPM: 126.4
RHH5301_R3667
221.9
RHH5237_R3609
181.1
RHH5266_R3638
126.4
RHH5209_R3580
181.1
Terminal effector memory CD4 T-cell nTPM: 100.1
Samples: 2
Max nTPM: 150.6
Min nTPM: 49.6
RHH5243_R3615
49.6
RHH5272_R3644
150.6
Terminal effector memory CD8 T-cell nTPM: 118.0
Samples: 4
Max nTPM: 143.4
Min nTPM: 55.5
RHH5232_R3604
143.4
RHH5204_R3575
142.8
RHH5261_R3633
55.5
RHH5296_R3662
130.1
Vd2 gdTCR nTPM: 164.7
Samples: 4
Max nTPM: 192.8
Min nTPM: 114.8
RHH5234_R3606
179.7
RHH5206_R3577
192.8
RHH5263_R3635
114.8
RHH5298_R3664
171.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
