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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
764.4
nTPM
Monaco:
215.2
nTPM
Schmiedel:
82.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
764.4
HPA sample
nTPM
gdT-cell nTPM: 618.4
Samples: 6
Max nTPM: 794.2
Min nTPM: 440.0
P10809_1007
545.4
P10809_1022
721.5
P10809_1041
794.2
P10809_1060
440.0
P10809_1077
584.0
P10809_1098
625.0
MAIT T-cell nTPM: 764.4
Samples: 6
Max nTPM: 916.8
Min nTPM: 515.6
P10809_1006
515.6
P10809_1024
832.6
P10809_1043
916.8
P10809_1062
776.8
P10809_1083
661.0
P10809_1097
883.4
Memory CD4 T-cell nTPM: 631.2
Samples: 6
Max nTPM: 781.8
Min nTPM: 489.8
P10809_1014
489.8
P10809_1026
781.8
P10809_1045
681.4
P10809_1064
597.3
P10809_1086
588.3
P10809_1113
648.7
Memory CD8 T-cell nTPM: 613.9
Samples: 5
Max nTPM: 724.6
Min nTPM: 488.6
P10809_1012
488.6
P10809_1027
659.4
P10809_1046
724.6
P10809_1065
607.0
P10809_1111
589.9
Naive CD4 T-cell nTPM: 540.6
Samples: 6
Max nTPM: 715.8
Min nTPM: 399.8
P10809_1015
399.8
P10809_1030
598.3
P10809_1049
715.8
P10809_1068
519.8
P10809_1085
510.7
P10809_1112
499.4
Naive CD8 T-cell nTPM: 557.1
Samples: 6
Max nTPM: 590.3
Min nTPM: 488.7
P10809_1016
513.2
P10809_1031
590.3
P10809_1050
584.7
P10809_1069
588.1
P10809_1087
577.3
P10809_1110
488.7
T-reg nTPM: 517.5
Samples: 6
Max nTPM: 732.5
Min nTPM: 334.7
P10809_1018
334.7
P10809_1037
477.2
P10809_1056
732.5
P10809_1075
448.6
P10809_1094
649.3
P10809_1106
462.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
215.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 115.2
Samples: 4
Max nTPM: 141.5
Min nTPM: 73.9
RHH5202_R3573
73.9
RHH5230_R3602
109.2
RHH5259_R3631
141.5
RHH5288_R3660
136.0
Effector memory CD8 T-cell nTPM: 87.3
Samples: 4
Max nTPM: 122.1
Min nTPM: 64.4
RHH5203_R3574
68.7
RHH5231_R3603
93.8
RHH5260_R3632
122.1
RHH5289_R3661
64.4
MAIT T-cell nTPM: 142.9
Samples: 4
Max nTPM: 161.8
Min nTPM: 108.6
RHH5233_R3605
108.6
RHH5205_R3576
139.5
RHH5262_R3634
161.8
RHH5297_R3663
161.5
Memory CD4 T-cell TFH nTPM: 91.3
Samples: 4
Max nTPM: 153.0
Min nTPM: 58.9
RHH5300_R3666
93.1
RHH5236_R3608
153.0
RHH5265_R3637
58.9
RHH5208_R3579
60.3
Memory CD4 T-cell Th1 nTPM: 134.8
Samples: 4
Max nTPM: 195.2
Min nTPM: 64.5
RHH5210_R3581
64.5
RHH5302_R3668
195.2
RHH5238_R3610
161.0
RHH5267_R3639
118.6
Memory CD4 T-cell Th1/Th17 nTPM: 128.1
Samples: 4
Max nTPM: 164.8
Min nTPM: 88.1
RHH5303_R3669
164.8
RHH5211_R3582
88.1
RHH5239_R3611
122.9
RHH5268_R3640
136.7
Memory CD4 T-cell Th17 nTPM: 111.9
Samples: 4
Max nTPM: 162.9
Min nTPM: 92.7
RHH5304_R3670
162.9
RHH5212_R3583
97.8
RHH5240_R3612
94.1
RHH5269_R3641
92.7
Memory CD4 T-cell Th2 nTPM: 134.8
Samples: 4
Max nTPM: 177.5
Min nTPM: 112.7
RHH5305_R3671
177.5
RHH5213_R3584
112.7
RHH5241_R3613
130.6
RHH5270_R3642
118.4
Naive CD4 T-cell nTPM: 107.7
Samples: 4
Max nTPM: 153.9
Min nTPM: 60.8
RHH5306_R3672
121.4
RHH5214_R3585
153.9
RHH5242_R3614
60.8
RHH5271_R3643
94.6
Naive CD8 T-cell nTPM: 87.9
Samples: 4
Max nTPM: 113.4
Min nTPM: 56.3
RHH5201_R3572
56.3
RHH5229_R3601
113.4
RHH5258_R3630
92.2
RHH5287_R3659
89.8
Non-Vd2 gdTCR nTPM: 110.0
Samples: 4
Max nTPM: 153.4
Min nTPM: 91.2
RHH5235_R3607
96.7
RHH5264_R3636
98.5
RHH5207_R3578
91.2
RHH5299_R3665
153.4
T-reg nTPM: 106.6
Samples: 4
Max nTPM: 130.6
Min nTPM: 82.1
RHH5301_R3667
130.6
RHH5237_R3609
105.3
RHH5266_R3638
108.2
RHH5209_R3580
82.1
Terminal effector memory CD4 T-cell nTPM: 99.8
Samples: 2
Max nTPM: 112.2
Min nTPM: 87.4
RHH5243_R3615
112.2
RHH5272_R3644
87.4
Terminal effector memory CD8 T-cell nTPM: 160.3
Samples: 4
Max nTPM: 279.4
Min nTPM: 60.3
RHH5232_R3604
60.3
RHH5204_R3575
279.4
RHH5261_R3633
162.4
RHH5296_R3662
139.1
Vd2 gdTCR nTPM: 215.2
Samples: 4
Max nTPM: 314.6
Min nTPM: 133.9
RHH5234_R3606
133.9
RHH5206_R3577
314.6
RHH5263_R3635
183.6
RHH5298_R3664
228.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
