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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
40.7
nTPM
Monaco:
129.8
nTPM
Schmiedel:
214.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
40.7
HPA sample
nTPM
gdT-cell nTPM: 31.0
Samples: 6
Max nTPM: 40.0
Min nTPM: 21.5
P10809_1007
21.5
P10809_1022
35.4
P10809_1041
40.0
P10809_1060
30.5
P10809_1077
30.0
P10809_1098
28.3
MAIT T-cell nTPM: 34.0
Samples: 6
Max nTPM: 42.6
Min nTPM: 25.8
P10809_1006
32.2
P10809_1024
42.6
P10809_1043
34.8
P10809_1062
38.6
P10809_1083
25.8
P10809_1097
29.8
Memory CD4 T-cell nTPM: 29.7
Samples: 6
Max nTPM: 34.8
Min nTPM: 25.3
P10809_1014
26.1
P10809_1026
25.3
P10809_1045
34.8
P10809_1064
31.6
P10809_1086
31.8
P10809_1113
28.5
Memory CD8 T-cell nTPM: 32.2
Samples: 5
Max nTPM: 35.6
Min nTPM: 30.5
P10809_1012
30.5
P10809_1027
32.0
P10809_1046
35.6
P10809_1065
32.0
P10809_1111
31.1
Naive CD4 T-cell nTPM: 28.4
Samples: 6
Max nTPM: 30.4
Min nTPM: 23.2
P10809_1015
23.2
P10809_1030
29.3
P10809_1049
30.4
P10809_1068
28.1
P10809_1085
29.8
P10809_1112
29.6
Naive CD8 T-cell nTPM: 28.0
Samples: 6
Max nTPM: 34.6
Min nTPM: 20.3
P10809_1016
25.0
P10809_1031
20.3
P10809_1050
29.8
P10809_1069
32.0
P10809_1087
34.6
P10809_1110
26.4
T-reg nTPM: 40.8
Samples: 6
Max nTPM: 50.6
Min nTPM: 32.7
P10809_1018
36.9
P10809_1037
37.9
P10809_1056
44.8
P10809_1075
32.7
P10809_1094
50.6
P10809_1106
41.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
129.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 112.1
Samples: 4
Max nTPM: 138.1
Min nTPM: 87.5
RHH5202_R3573
121.5
RHH5230_R3602
87.5
RHH5259_R3631
138.1
RHH5288_R3660
101.3
Effector memory CD8 T-cell nTPM: 111.7
Samples: 4
Max nTPM: 128.0
Min nTPM: 94.3
RHH5203_R3574
94.3
RHH5231_R3603
97.0
RHH5260_R3632
127.4
RHH5289_R3661
128.0
MAIT T-cell nTPM: 123.8
Samples: 4
Max nTPM: 147.1
Min nTPM: 101.2
RHH5233_R3605
147.1
RHH5205_R3576
137.2
RHH5262_R3634
109.6
RHH5297_R3663
101.2
Memory CD4 T-cell TFH nTPM: 102.9
Samples: 4
Max nTPM: 113.5
Min nTPM: 96.9
RHH5300_R3666
100.1
RHH5236_R3608
101.2
RHH5265_R3637
96.9
RHH5208_R3579
113.5
Memory CD4 T-cell Th1 nTPM: 114.9
Samples: 4
Max nTPM: 121.2
Min nTPM: 106.7
RHH5210_R3581
111.7
RHH5302_R3668
106.7
RHH5238_R3610
120.0
RHH5267_R3639
121.2
Memory CD4 T-cell Th1/Th17 nTPM: 127.5
Samples: 4
Max nTPM: 161.5
Min nTPM: 98.9
RHH5303_R3669
130.2
RHH5211_R3582
98.9
RHH5239_R3611
161.5
RHH5268_R3640
119.4
Memory CD4 T-cell Th17 nTPM: 128.6
Samples: 4
Max nTPM: 153.0
Min nTPM: 107.9
RHH5304_R3670
130.5
RHH5212_R3583
107.9
RHH5240_R3612
153.0
RHH5269_R3641
123.1
Memory CD4 T-cell Th2 nTPM: 117.8
Samples: 4
Max nTPM: 146.9
Min nTPM: 99.1
RHH5305_R3671
99.1
RHH5213_R3584
118.6
RHH5241_R3613
106.7
RHH5270_R3642
146.9
Naive CD4 T-cell nTPM: 113.0
Samples: 4
Max nTPM: 135.2
Min nTPM: 80.2
RHH5306_R3672
114.8
RHH5214_R3585
135.2
RHH5242_R3614
80.2
RHH5271_R3643
121.9
Naive CD8 T-cell nTPM: 117.1
Samples: 4
Max nTPM: 156.4
Min nTPM: 88.3
RHH5201_R3572
156.4
RHH5229_R3601
125.5
RHH5258_R3630
88.3
RHH5287_R3659
98.2
Non-Vd2 gdTCR nTPM: 128.9
Samples: 4
Max nTPM: 151.5
Min nTPM: 106.6
RHH5235_R3607
124.7
RHH5264_R3636
132.8
RHH5207_R3578
151.5
RHH5299_R3665
106.6
T-reg nTPM: 119.9
Samples: 4
Max nTPM: 139.7
Min nTPM: 91.8
RHH5301_R3667
91.8
RHH5237_R3609
139.7
RHH5266_R3638
122.3
RHH5209_R3580
125.7
Terminal effector memory CD4 T-cell nTPM: 129.8
Samples: 2
Max nTPM: 139.8
Min nTPM: 119.8
RHH5243_R3615
139.8
RHH5272_R3644
119.8
Terminal effector memory CD8 T-cell nTPM: 119.3
Samples: 4
Max nTPM: 130.8
Min nTPM: 106.2
RHH5232_R3604
106.2
RHH5204_R3575
111.7
RHH5261_R3633
128.4
RHH5296_R3662
130.8
Vd2 gdTCR nTPM: 122.5
Samples: 4
Max nTPM: 161.4
Min nTPM: 104.5
RHH5234_R3606
104.5
RHH5206_R3577
115.1
RHH5263_R3635
161.4
RHH5298_R3664
109.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
