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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
109.8
nTPM
Monaco:
92.7
nTPM
Schmiedel:
61.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
109.8
HPA sample
nTPM
gdT-cell nTPM: 66.5
Samples: 6
Max nTPM: 71.8
Min nTPM: 50.5
P10809_1007
69.3
P10809_1022
67.7
P10809_1041
71.8
P10809_1060
50.5
P10809_1077
68.8
P10809_1098
70.9
MAIT T-cell nTPM: 76.8
Samples: 6
Max nTPM: 86.7
Min nTPM: 63.0
P10809_1006
63.4
P10809_1024
86.3
P10809_1043
63.0
P10809_1062
77.5
P10809_1083
83.6
P10809_1097
86.7
Memory CD4 T-cell nTPM: 78.4
Samples: 6
Max nTPM: 87.5
Min nTPM: 64.5
P10809_1014
75.9
P10809_1026
84.2
P10809_1045
64.5
P10809_1064
76.1
P10809_1086
81.9
P10809_1113
87.5
Memory CD8 T-cell nTPM: 71.4
Samples: 5
Max nTPM: 82.9
Min nTPM: 53.8
P10809_1012
66.0
P10809_1027
81.7
P10809_1046
53.8
P10809_1065
72.7
P10809_1111
82.9
Naive CD4 T-cell nTPM: 84.7
Samples: 6
Max nTPM: 93.9
Min nTPM: 77.1
P10809_1015
93.9
P10809_1030
91.8
P10809_1049
81.1
P10809_1068
78.2
P10809_1085
77.1
P10809_1112
86.3
Naive CD8 T-cell nTPM: 73.7
Samples: 6
Max nTPM: 85.7
Min nTPM: 59.8
P10809_1016
85.7
P10809_1031
69.9
P10809_1050
65.0
P10809_1069
59.8
P10809_1087
78.8
P10809_1110
83.1
T-reg nTPM: 109.8
Samples: 6
Max nTPM: 130.6
Min nTPM: 91.8
P10809_1018
97.7
P10809_1037
119.8
P10809_1056
107.4
P10809_1075
111.6
P10809_1094
130.6
P10809_1106
91.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
92.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 58.9
Samples: 4
Max nTPM: 76.4
Min nTPM: 32.7
RHH5202_R3573
76.4
RHH5230_R3602
32.7
RHH5259_R3631
50.4
RHH5288_R3660
76.0
Effector memory CD8 T-cell nTPM: 52.5
Samples: 4
Max nTPM: 75.9
Min nTPM: 43.6
RHH5203_R3574
75.9
RHH5231_R3603
44.2
RHH5260_R3632
43.6
RHH5289_R3661
46.4
MAIT T-cell nTPM: 42.1
Samples: 4
Max nTPM: 55.9
Min nTPM: 31.3
RHH5233_R3605
37.4
RHH5205_R3576
31.3
RHH5262_R3634
55.9
RHH5297_R3663
43.8
Memory CD4 T-cell TFH nTPM: 92.7
Samples: 4
Max nTPM: 102.7
Min nTPM: 78.5
RHH5300_R3666
78.5
RHH5236_R3608
102.7
RHH5265_R3637
99.6
RHH5208_R3579
90.0
Memory CD4 T-cell Th1 nTPM: 53.6
Samples: 4
Max nTPM: 82.6
Min nTPM: 30.4
RHH5210_R3581
55.1
RHH5302_R3668
82.6
RHH5238_R3610
30.4
RHH5267_R3639
46.2
Memory CD4 T-cell Th1/Th17 nTPM: 61.3
Samples: 4
Max nTPM: 89.8
Min nTPM: 27.1
RHH5303_R3669
89.8
RHH5211_R3582
73.1
RHH5239_R3611
27.1
RHH5268_R3640
55.2
Memory CD4 T-cell Th17 nTPM: 58.3
Samples: 4
Max nTPM: 79.7
Min nTPM: 43.4
RHH5304_R3670
63.5
RHH5212_R3583
79.7
RHH5240_R3612
43.4
RHH5269_R3641
46.6
Memory CD4 T-cell Th2 nTPM: 77.5
Samples: 4
Max nTPM: 97.1
Min nTPM: 66.0
RHH5305_R3671
75.8
RHH5213_R3584
71.2
RHH5241_R3613
97.1
RHH5270_R3642
66.0
Naive CD4 T-cell nTPM: 82.8
Samples: 4
Max nTPM: 103.2
Min nTPM: 66.4
RHH5306_R3672
87.3
RHH5214_R3585
103.2
RHH5242_R3614
66.4
RHH5271_R3643
74.2
Naive CD8 T-cell nTPM: 58.1
Samples: 4
Max nTPM: 82.4
Min nTPM: 26.4
RHH5201_R3572
78.6
RHH5229_R3601
26.4
RHH5258_R3630
82.4
RHH5287_R3659
44.9
Non-Vd2 gdTCR nTPM: 55.3
Samples: 4
Max nTPM: 75.0
Min nTPM: 35.8
RHH5235_R3607
35.8
RHH5264_R3636
75.0
RHH5207_R3578
54.8
RHH5299_R3665
55.6
T-reg nTPM: 73.8
Samples: 4
Max nTPM: 94.3
Min nTPM: 45.2
RHH5301_R3667
85.0
RHH5237_R3609
94.3
RHH5266_R3638
45.2
RHH5209_R3580
70.8
Terminal effector memory CD4 T-cell nTPM: 36.2
Samples: 2
Max nTPM: 51.2
Min nTPM: 21.1
RHH5243_R3615
21.1
RHH5272_R3644
51.2
Terminal effector memory CD8 T-cell nTPM: 53.4
Samples: 4
Max nTPM: 65.0
Min nTPM: 33.1
RHH5232_R3604
55.5
RHH5204_R3575
65.0
RHH5261_R3633
33.1
RHH5296_R3662
59.9
Vd2 gdTCR nTPM: 59.5
Samples: 4
Max nTPM: 76.7
Min nTPM: 43.2
RHH5234_R3606
53.7
RHH5206_R3577
76.7
RHH5263_R3635
43.2
RHH5298_R3664
64.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
