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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
143.2
nTPM
Monaco:
1304.6
nTPM
Schmiedel:
41.3
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
143.2
HPA sample
nTPM
gdT-cell nTPM: 143.2
Samples: 6
Max nTPM: 185.3
Min nTPM: 107.8
P10809_1007
114.3
P10809_1022
129.9
P10809_1041
162.7
P10809_1060
159.2
P10809_1077
185.3
P10809_1098
107.8
MAIT T-cell nTPM: 3.0
Samples: 6
Max nTPM: 12.0
Min nTPM: 0.0
P10809_1006
0.6
P10809_1024
0.9
P10809_1043
0.0
P10809_1062
4.4
P10809_1083
12.0
P10809_1097
0.1
Memory CD4 T-cell nTPM: 25.6
Samples: 6
Max nTPM: 80.8
Min nTPM: 0.5
P10809_1014
2.3
P10809_1026
3.2
P10809_1045
7.1
P10809_1064
59.4
P10809_1086
80.8
P10809_1113
0.5
Memory CD8 T-cell nTPM: 134.3
Samples: 5
Max nTPM: 162.0
Min nTPM: 84.0
P10809_1012
113.7
P10809_1027
162.0
P10809_1046
151.2
P10809_1065
160.8
P10809_1111
84.0
Naive CD4 T-cell nTPM: 11.0
Samples: 6
Max nTPM: 57.9
Min nTPM: 0.0
P10809_1015
1.6
P10809_1030
0.0
P10809_1049
1.1
P10809_1068
5.0
P10809_1085
57.9
P10809_1112
0.2
Naive CD8 T-cell nTPM: 103.1
Samples: 6
Max nTPM: 240.5
Min nTPM: 22.5
P10809_1016
22.5
P10809_1031
95.4
P10809_1050
106.5
P10809_1069
114.9
P10809_1087
240.5
P10809_1110
39.0
T-reg nTPM: 0.1
Samples: 6
Max nTPM: 0.2
Min nTPM: 0.0
P10809_1018
0.0
P10809_1037
0.0
P10809_1056
0.0
P10809_1075
0.2
P10809_1094
0.2
P10809_1106
0.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1304.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 105.7
Samples: 4
Max nTPM: 141.6
Min nTPM: 38.8
RHH5202_R3573
104.9
RHH5230_R3602
38.8
RHH5259_R3631
137.5
RHH5288_R3660
141.6
Effector memory CD8 T-cell nTPM: 745.3
Samples: 4
Max nTPM: 1068.4
Min nTPM: 440.8
RHH5203_R3574
440.8
RHH5231_R3603
735.9
RHH5260_R3632
736.2
RHH5289_R3661
1068.4
MAIT T-cell nTPM: 8.7
Samples: 4
Max nTPM: 15.5
Min nTPM: 3.8
RHH5233_R3605
11.5
RHH5205_R3576
15.5
RHH5262_R3634
3.8
RHH5297_R3663
3.8
Memory CD4 T-cell TFH nTPM: 10.7
Samples: 4
Max nTPM: 23.2
Min nTPM: 3.3
RHH5300_R3666
7.1
RHH5236_R3608
9.0
RHH5265_R3637
3.3
RHH5208_R3579
23.2
Memory CD4 T-cell Th1 nTPM: 41.3
Samples: 4
Max nTPM: 47.2
Min nTPM: 25.4
RHH5210_R3581
25.4
RHH5302_R3668
47.2
RHH5238_R3610
47.2
RHH5267_R3639
45.3
Memory CD4 T-cell Th1/Th17 nTPM: 21.2
Samples: 4
Max nTPM: 28.1
Min nTPM: 16.9
RHH5303_R3669
28.1
RHH5211_R3582
16.9
RHH5239_R3611
17.3
RHH5268_R3640
22.3
Memory CD4 T-cell Th17 nTPM: 10.7
Samples: 4
Max nTPM: 15.2
Min nTPM: 2.3
RHH5304_R3670
10.9
RHH5212_R3583
2.3
RHH5240_R3612
15.2
RHH5269_R3641
14.5
Memory CD4 T-cell Th2 nTPM: 11.7
Samples: 4
Max nTPM: 19.9
Min nTPM: 7.1
RHH5305_R3671
12.2
RHH5213_R3584
7.1
RHH5241_R3613
7.6
RHH5270_R3642
19.9
Naive CD4 T-cell nTPM: 16.3
Samples: 4
Max nTPM: 25.5
Min nTPM: 9.8
RHH5306_R3672
16.1
RHH5214_R3585
13.8
RHH5242_R3614
25.5
RHH5271_R3643
9.8
Naive CD8 T-cell nTPM: 7.0
Samples: 4
Max nTPM: 12.7
Min nTPM: 0.8
RHH5201_R3572
7.3
RHH5229_R3601
12.7
RHH5258_R3630
7.2
RHH5287_R3659
0.8
Non-Vd2 gdTCR nTPM: 1240.5
Samples: 4
Max nTPM: 1373.4
Min nTPM: 1089.3
RHH5235_R3607
1145.3
RHH5264_R3636
1373.4
RHH5207_R3578
1089.3
RHH5299_R3665
1354.1
T-reg nTPM: 12.3
Samples: 4
Max nTPM: 18.4
Min nTPM: 7.9
RHH5301_R3667
7.9
RHH5237_R3609
18.4
RHH5266_R3638
9.1
RHH5209_R3580
13.6
Terminal effector memory CD4 T-cell nTPM: 818.6
Samples: 2
Max nTPM: 1104.8
Min nTPM: 532.4
RHH5243_R3615
1104.8
RHH5272_R3644
532.4
Terminal effector memory CD8 T-cell nTPM: 1304.7
Samples: 4
Max nTPM: 1506.0
Min nTPM: 1155.4
RHH5232_R3604
1252.6
RHH5204_R3575
1155.4
RHH5261_R3633
1304.6
RHH5296_R3662
1506.0
Vd2 gdTCR nTPM: 209.5
Samples: 4
Max nTPM: 287.5
Min nTPM: 151.7
RHH5234_R3606
151.7
RHH5206_R3577
287.5
RHH5263_R3635
188.8
RHH5298_R3664
209.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
