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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
57.6
nTPM
Monaco:
140.8
nTPM
Schmiedel:
59.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
57.6
HPA sample
nTPM
gdT-cell nTPM: 48.2
Samples: 6
Max nTPM: 52.6
Min nTPM: 32.1
P10809_1007
51.3
P10809_1022
49.8
P10809_1041
51.8
P10809_1060
51.3
P10809_1077
32.1
P10809_1098
52.6
MAIT T-cell nTPM: 53.8
Samples: 6
Max nTPM: 72.8
Min nTPM: 46.3
P10809_1006
57.4
P10809_1024
72.8
P10809_1043
52.2
P10809_1062
47.4
P10809_1083
46.4
P10809_1097
46.3
Memory CD4 T-cell nTPM: 53.2
Samples: 6
Max nTPM: 70.4
Min nTPM: 40.7
P10809_1014
70.4
P10809_1026
51.6
P10809_1045
51.0
P10809_1064
40.7
P10809_1086
51.9
P10809_1113
53.4
Memory CD8 T-cell nTPM: 53.6
Samples: 5
Max nTPM: 68.7
Min nTPM: 41.2
P10809_1012
68.7
P10809_1027
60.7
P10809_1046
49.0
P10809_1065
41.2
P10809_1111
48.4
Naive CD4 T-cell nTPM: 50.4
Samples: 6
Max nTPM: 65.7
Min nTPM: 37.4
P10809_1015
65.7
P10809_1030
37.4
P10809_1049
46.1
P10809_1068
41.1
P10809_1085
64.0
P10809_1112
47.9
Naive CD8 T-cell nTPM: 51.3
Samples: 6
Max nTPM: 67.1
Min nTPM: 42.9
P10809_1016
67.1
P10809_1031
45.0
P10809_1050
46.2
P10809_1069
42.9
P10809_1087
49.2
P10809_1110
57.5
T-reg nTPM: 57.6
Samples: 6
Max nTPM: 81.3
Min nTPM: 38.7
P10809_1018
67.9
P10809_1037
57.2
P10809_1056
38.7
P10809_1075
44.9
P10809_1094
81.3
P10809_1106
55.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
140.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 109.0
Samples: 4
Max nTPM: 146.6
Min nTPM: 84.7
RHH5202_R3573
108.6
RHH5230_R3602
96.1
RHH5259_R3631
84.7
RHH5288_R3660
146.6
Effector memory CD8 T-cell nTPM: 109.0
Samples: 4
Max nTPM: 138.5
Min nTPM: 85.1
RHH5203_R3574
138.5
RHH5231_R3603
93.4
RHH5260_R3632
85.1
RHH5289_R3661
119.0
MAIT T-cell nTPM: 133.8
Samples: 4
Max nTPM: 164.0
Min nTPM: 76.4
RHH5233_R3605
160.4
RHH5205_R3576
76.4
RHH5262_R3634
134.2
RHH5297_R3663
164.0
Memory CD4 T-cell TFH nTPM: 135.2
Samples: 4
Max nTPM: 172.5
Min nTPM: 109.3
RHH5300_R3666
132.8
RHH5236_R3608
109.3
RHH5265_R3637
126.3
RHH5208_R3579
172.5
Memory CD4 T-cell Th1 nTPM: 121.9
Samples: 4
Max nTPM: 172.7
Min nTPM: 79.0
RHH5210_R3581
129.1
RHH5302_R3668
172.7
RHH5238_R3610
79.0
RHH5267_R3639
106.9
Memory CD4 T-cell Th1/Th17 nTPM: 113.8
Samples: 4
Max nTPM: 160.8
Min nTPM: 57.4
RHH5303_R3669
160.8
RHH5211_R3582
129.6
RHH5239_R3611
57.4
RHH5268_R3640
107.2
Memory CD4 T-cell Th17 nTPM: 96.7
Samples: 4
Max nTPM: 139.4
Min nTPM: 70.8
RHH5304_R3670
102.9
RHH5212_R3583
139.4
RHH5240_R3612
73.6
RHH5269_R3641
70.8
Memory CD4 T-cell Th2 nTPM: 112.0
Samples: 4
Max nTPM: 123.0
Min nTPM: 96.6
RHH5305_R3671
118.8
RHH5213_R3584
123.0
RHH5241_R3613
109.7
RHH5270_R3642
96.6
Naive CD4 T-cell nTPM: 125.4
Samples: 4
Max nTPM: 152.9
Min nTPM: 98.9
RHH5306_R3672
134.8
RHH5214_R3585
152.9
RHH5242_R3614
98.9
RHH5271_R3643
114.8
Naive CD8 T-cell nTPM: 109.7
Samples: 4
Max nTPM: 148.2
Min nTPM: 56.0
RHH5201_R3572
148.2
RHH5229_R3601
56.0
RHH5258_R3630
138.4
RHH5287_R3659
96.2
Non-Vd2 gdTCR nTPM: 127.0
Samples: 4
Max nTPM: 161.8
Min nTPM: 71.5
RHH5235_R3607
71.5
RHH5264_R3636
137.9
RHH5207_R3578
136.7
RHH5299_R3665
161.8
T-reg nTPM: 118.8
Samples: 4
Max nTPM: 157.3
Min nTPM: 98.8
RHH5301_R3667
157.3
RHH5237_R3609
117.4
RHH5266_R3638
101.7
RHH5209_R3580
98.8
Terminal effector memory CD4 T-cell nTPM: 104.4
Samples: 2
Max nTPM: 146.2
Min nTPM: 62.6
RHH5243_R3615
62.6
RHH5272_R3644
146.2
Terminal effector memory CD8 T-cell nTPM: 135.9
Samples: 4
Max nTPM: 219.1
Min nTPM: 89.0
RHH5232_R3604
103.2
RHH5204_R3575
219.1
RHH5261_R3633
89.0
RHH5296_R3662
132.2
Vd2 gdTCR nTPM: 140.8
Samples: 4
Max nTPM: 169.2
Min nTPM: 114.9
RHH5234_R3606
115.1
RHH5206_R3577
164.0
RHH5263_R3635
114.9
RHH5298_R3664
169.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
