HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:189.1 nTPM
HPA Brain:91.3 nTPM
GTEx:189.1 nTPM
FANTOM5:102.7 Scaled Tags Per Million
Pig:107.3 nTPM
Mouse:84.7 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043336
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 91.3
Sample id Sample description nTPM
Hippocampus
nTPM: 81.0
1898 Male, age 80, left hemisphere 133.3
1855 Male, age 76, left hemisphere 85.4
1911 Female, age 85, right hemisphere 74.8
2529 Female, age 94, left hemisphere 70.0
2148 Female, age 91, left hemisphere 62.6
2621 Female, age 67, right hemisphere 59.9
Dentate gyrus
nTPM: 79.1
2010 Male, age 76, both hemispheres 111.4
1927 Female, age 91, both hemispheres 97.6
2246 Female, age 85, both hemispheres 80.5
2530 Female, age 94, left hemisphere 77.3
2528 Male, age 74, both hemispheres 61.0
2531 Female, age 67, both hemispheres 47.1
Entorhinal gyrus
nTPM: 65.6
1938 Female, age 85, left hemisphere 91.6
2117 Female, age 91, right hemisphere 74.0
1787 Male, age 76, left hemisphere 73.1
2764 Male, age 80, right hemisphere 62.5
2686 Male, age 75, right hemisphere 50.3
2613 Female, age 94, left hemisphere 42.4
Hippocampus, CA1
nTPM: 90.7
2749 Male, age 80, left hemisphere 116.1
1873 Female, age 85, both hemispheres 107.7
2045 Male, age 76, both hemispheres 87.6
2527 Male, age 74, both hemispheres 75.3
2082 Female, age 91, right hemisphere 66.6
Hippocampus, CA2
nTPM: 81.7
1892 Male, age 76, both hemispheres 121.9
1963 Male, age 80, left hemisphere 97.5
2249 Male, age 74, both hemispheres 81.4
2113 Female, age 91, right hemisphere 64.0
1940 Female, age 85, left hemisphere 63.9
2437 Female, age 94, left hemisphere 61.7
Hippocampus, CA3
nTPM: 79.3
1867 Male, age 76, both hemispheres 109.4
2137 Male, age 80, left hemisphere 94.5
1891 Female, age 85, both hemispheres 86.7
2436 Male, age 74, both hemispheres 84.0
2620 Female, age 94, left hemisphere 53.9
2861 Female, age 67, both hemispheres 47.2
Parahippocampal cortex
nTPM: 75.8
1850 Male, age 80, both hemispheres 106.8
1933 Female, age 85, both hemispheres 90.3
2018 Male, age 76, both hemispheres 85.8
2250 Female, age 67, right hemisphere 82.2
1990 Female, age 91, right hemisphere 79.7
2245 Female, age 91, both hemispheres 71.3
2693 Female, age 94, both hemispheres 67.7
2692 Male, age 74, both hemispheres 61.3
2532 Female, age 72, left hemisphere 58.0
2622 Female, age 67, right hemisphere 54.8
Perirhinal gyrus
nTPM: 91.3
1841 Female, age 85, right hemisphere 99.6
1847 Female, age 91, left hemisphere 99.3
1794 Male, age 80, right hemisphere 98.9
2521 Female, age 94, right hemisphere 82.9
2848 Male, age 76, right hemisphere 75.8
Subiculum
nTPM: 71.5
1901 Male, age 80, both hemispheres 93.0
1977 Female, age 85, both hemispheres 80.2
2042 Male, age 76, both hemispheres 72.8
2729 Female, age 91, right hemisphere 66.0
2438 Female, age 94, left hemisphere 60.0
2619 Male, age 74, both hemispheres 56.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 189.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 189.1
Samples: 197

Max nTPM: 536.9
Min nTPM: 78.3
Std nTPM: 55.5
Median nTPM: 181.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 536.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 424.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 371.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 322.1
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 289.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 283.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 280.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 279.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 279.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 279.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 274.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 102.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 102.7
FF:10169-103B7 60 years, female 141.2
FF:10153-102I9 76 years, female 64.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 107.3
Pig sample Sample description nTPM
Subiculum
nTPM: 88.2
Samples: 4

Max nTPM: 115.6
Min nTPM: 73.6
Sample A Female 115.6
Sample B Female 77.0
Sample C Male 73.6
Sample D Male 86.5
Dorsal hippocampus
nTPM: 101.0
Samples: 4

Max nTPM: 135.0
Min nTPM: 66.5
Sample A Female 135.0
Sample B Female 92.1
Sample C Male 110.4
Sample D Male 66.5
Entorhinal cortex
nTPM: 107.3
Samples: 4

Max nTPM: 155.4
Min nTPM: 81.2
Sample A Female 90.0
Sample B Female 155.4
Sample C Male 102.7
Sample D Male 81.2
Ventral hippocampus
nTPM: 81.7
Samples: 4

Max nTPM: 97.7
Min nTPM: 67.3
Sample A Female 97.7
Sample B Female 67.3
Sample C Male 74.6
Sample D Male 87.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 84.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 76.7
Samples: 4

Max nTPM: 81.8
Min nTPM: 62.1
Sample A Male 81.3
Sample B Male 81.4
Sample C Female 81.8
Sample D Female 62.1
Hippocampal formation
nTPM: 84.7
Samples: 4

Max nTPM: 100.9
Min nTPM: 75.9
Sample A Male 100.9
Sample B Male 78.4
Sample C Female 75.9
Sample D Female 83.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
2291 Antisense, RP_040604_01_A01, Mouse strain C57BL/6J (56 days, male) 0.1
2292 Antisense, RP_040604_01_A01, Mouse strain C57BL/6J (56 days, male) 0.0

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