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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
99.7
nTPM
Monaco:
164.7
nTPM
Schmiedel:
74.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
99.7
HPA sample
nTPM
gdT-cell nTPM: 73.1
Samples: 6
Max nTPM: 99.4
Min nTPM: 51.1
P10809_1007
51.1
P10809_1022
71.7
P10809_1041
76.6
P10809_1060
60.1
P10809_1077
99.4
P10809_1098
79.5
MAIT T-cell nTPM: 65.9
Samples: 6
Max nTPM: 91.8
Min nTPM: 43.4
P10809_1006
43.4
P10809_1024
85.5
P10809_1043
55.3
P10809_1062
56.8
P10809_1083
62.7
P10809_1097
91.8
Memory CD4 T-cell nTPM: 71.8
Samples: 6
Max nTPM: 108.4
Min nTPM: 44.9
P10809_1014
55.0
P10809_1026
44.9
P10809_1045
55.4
P10809_1064
79.3
P10809_1086
108.4
P10809_1113
87.7
Memory CD8 T-cell nTPM: 73.6
Samples: 5
Max nTPM: 94.9
Min nTPM: 51.3
P10809_1012
60.1
P10809_1027
74.6
P10809_1046
51.3
P10809_1065
94.9
P10809_1111
87.2
Naive CD4 T-cell nTPM: 60.5
Samples: 6
Max nTPM: 76.9
Min nTPM: 51.5
P10809_1015
52.7
P10809_1030
55.3
P10809_1049
51.5
P10809_1068
64.5
P10809_1085
76.9
P10809_1112
62.1
Naive CD8 T-cell nTPM: 70.7
Samples: 6
Max nTPM: 107.4
Min nTPM: 50.1
P10809_1016
50.1
P10809_1031
60.2
P10809_1050
66.3
P10809_1069
77.5
P10809_1087
107.4
P10809_1110
62.9
T-reg nTPM: 99.7
Samples: 6
Max nTPM: 135.5
Min nTPM: 74.9
P10809_1018
76.5
P10809_1037
135.5
P10809_1056
74.9
P10809_1075
106.6
P10809_1094
95.0
P10809_1106
109.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
164.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 109.3
Samples: 4
Max nTPM: 159.3
Min nTPM: 68.4
RHH5202_R3573
159.3
RHH5230_R3602
84.6
RHH5259_R3631
68.4
RHH5288_R3660
124.9
Effector memory CD8 T-cell nTPM: 154.5
Samples: 4
Max nTPM: 225.3
Min nTPM: 100.3
RHH5203_R3574
225.3
RHH5231_R3603
151.5
RHH5260_R3632
100.3
RHH5289_R3661
140.9
MAIT T-cell nTPM: 111.9
Samples: 4
Max nTPM: 117.8
Min nTPM: 97.2
RHH5233_R3605
115.8
RHH5205_R3576
97.2
RHH5262_R3634
117.8
RHH5297_R3663
116.9
Memory CD4 T-cell TFH nTPM: 132.6
Samples: 4
Max nTPM: 178.1
Min nTPM: 102.3
RHH5300_R3666
109.8
RHH5236_R3608
140.1
RHH5265_R3637
102.3
RHH5208_R3579
178.1
Memory CD4 T-cell Th1 nTPM: 97.5
Samples: 4
Max nTPM: 138.1
Min nTPM: 71.8
RHH5210_R3581
100.9
RHH5302_R3668
138.1
RHH5238_R3610
79.0
RHH5267_R3639
71.8
Memory CD4 T-cell Th1/Th17 nTPM: 103.2
Samples: 4
Max nTPM: 147.2
Min nTPM: 56.7
RHH5303_R3669
147.2
RHH5211_R3582
123.1
RHH5239_R3611
56.7
RHH5268_R3640
85.7
Memory CD4 T-cell Th17 nTPM: 92.0
Samples: 4
Max nTPM: 97.9
Min nTPM: 88.7
RHH5304_R3670
88.7
RHH5212_R3583
90.6
RHH5240_R3612
90.9
RHH5269_R3641
97.9
Memory CD4 T-cell Th2 nTPM: 107.2
Samples: 4
Max nTPM: 125.2
Min nTPM: 88.8
RHH5305_R3671
125.2
RHH5213_R3584
90.7
RHH5241_R3613
124.1
RHH5270_R3642
88.8
Naive CD4 T-cell nTPM: 94.6
Samples: 4
Max nTPM: 106.1
Min nTPM: 79.4
RHH5306_R3672
94.7
RHH5214_R3585
106.1
RHH5242_R3614
98.3
RHH5271_R3643
79.4
Naive CD8 T-cell nTPM: 90.5
Samples: 4
Max nTPM: 121.3
Min nTPM: 56.9
RHH5201_R3572
121.3
RHH5229_R3601
56.9
RHH5258_R3630
89.3
RHH5287_R3659
94.4
Non-Vd2 gdTCR nTPM: 149.0
Samples: 4
Max nTPM: 210.0
Min nTPM: 87.1
RHH5235_R3607
87.1
RHH5264_R3636
163.1
RHH5207_R3578
210.0
RHH5299_R3665
135.8
T-reg nTPM: 95.2
Samples: 4
Max nTPM: 116.8
Min nTPM: 71.1
RHH5301_R3667
109.8
RHH5237_R3609
116.8
RHH5266_R3638
71.1
RHH5209_R3580
83.1
Terminal effector memory CD4 T-cell nTPM: 128.8
Samples: 2
Max nTPM: 150.0
Min nTPM: 107.5
RHH5243_R3615
107.5
RHH5272_R3644
150.0
Terminal effector memory CD8 T-cell nTPM: 164.7
Samples: 4
Max nTPM: 206.5
Min nTPM: 105.7
RHH5232_R3604
206.5
RHH5204_R3575
170.0
RHH5261_R3633
105.7
RHH5296_R3662
176.5
Vd2 gdTCR nTPM: 124.0
Samples: 4
Max nTPM: 202.2
Min nTPM: 85.1
RHH5234_R3606
107.1
RHH5206_R3577
202.2
RHH5263_R3635
85.1
RHH5298_R3664
101.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
