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                                  • OR52N4
                                  IMMUNE CELL B-CELLS Show tissue menu
                                  B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
                                  Immune cell proteome
                                  B-cells
                                  B-CELLS - Expression summary
                                  Protein expressioni

                                  On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

                                  Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

                                  If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                  No data
                                  RNA expressioni

                                  A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

                                  The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

                                  Scroll down to view mRNA expression data in more detail.
                                  HPA:0.4 nTPM
                                  Monaco:12.4 nTPM
                                  Schmiedel:24.1 TPM

                                  B-CELLS - Annotated protein expression
                                  Pending normal tissue analysis

                                  B-CELLS - HPA RNA-seqi

                                  The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

                                  Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Max nTPM 0.4
                                  HPA sample nTPM
                                  0.00.10.10.00.10.00.10.20.30.40.50.60.70.8
                                  0.00.10.10.00.10.00.10.20.30.40.50.60.70.8
                                  Memory B-cell
                                  nTPM: 0.2
                                  Samples: 6

                                  Max nTPM: 0.8
                                  Min nTPM: 0.0
                                  P10809_1017 0.1
                                  P10809_1025 0.0
                                  P10809_1044 0.0
                                  P10809_1063 0.0
                                  P10809_1092 0.1
                                  P10809_1105 0.8
                                  0.10.30.80.01.10.00.10.20.30.40.50.60.70.80.91.01.1
                                  0.10.30.80.01.10.00.10.20.30.40.50.60.70.80.91.01.1
                                  Naive B-cell
                                  nTPM: 0.4
                                  Samples: 6

                                  Max nTPM: 1.1
                                  Min nTPM: 0.0
                                  P10809_1011 1.1
                                  P10809_1029 0.3
                                  P10809_1048 0.0
                                  P10809_1067 0.2
                                  P10809_1091 0.9
                                  P10809_1104 0.0

                                  B-CELLS - Monaco RNA-seqi

                                  RNA-Seq data generated by Monaco et al is reported as average nTPM.

                                  The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

                                  Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

                                  Max nTPM 12.4
                                  Monaco sample nTPM
                                  1.22.34.40.58.1012345678
                                  1.22.34.40.58.1012345678
                                  Exhausted memory B-cell
                                  nTPM: 3.3
                                  Samples: 4

                                  Max nTPM: 8.1
                                  Min nTPM: 0.5
                                  RHH5310_R3677 8.1
                                  RHH5218_R3590 1.4
                                  RHH5247_R3619 0.5
                                  RHH5276_R3648 3.2
                                  9.112.816.12.221.902468101214161820
                                  9.112.816.12.221.902468101214161820
                                  Naive B-cell
                                  nTPM: 12.4
                                  Samples: 4

                                  Max nTPM: 21.9
                                  Min nTPM: 2.2
                                  RHH5308_R3675 14.2
                                  RHH5216_R3588 21.9
                                  RHH5245_R3617 11.4
                                  RHH5274_R3646 2.2
                                  6.38.611.95.615.702468101214
                                  6.38.611.95.615.702468101214
                                  Non-switched memory B-cell
                                  nTPM: 9.6
                                  Samples: 4

                                  Max nTPM: 15.7
                                  Min nTPM: 5.6
                                  RHH5309_R3676 15.7
                                  RHH5217_R3589 10.6
                                  RHH5246_R3618 6.6
                                  RHH5275_R3647 5.6
                                  0.00.00.00.00.00
                                  0.00.00.00.00.00
                                  Plasmablast
                                  nTPM: 0.0
                                  Samples: 4

                                  Max nTPM: 0.0
                                  Min nTPM: 0.0
                                  RHH5312_R3679 0.0
                                  RHH5220_R3592 0.0
                                  RHH5249_R3621 0.0
                                  RHH5278_R3650 0.0
                                  5.36.38.85.213.1012345678910111213
                                  5.36.38.85.213.1012345678910111213
                                  Switched memory B-cell
                                  nTPM: 7.8
                                  Samples: 4

                                  Max nTPM: 13.1
                                  Min nTPM: 5.2
                                  RHH5311_R3678 5.3
                                  RHH5219_R3591 13.1
                                  RHH5248_R3620 5.2
                                  RHH5277_R3649 7.4

                                  B-CELLS - Schmiedel RNA-seqi

                                  RNA-Seq data generated by Schmiedel et al is reported as average TPM.

                                  The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

                                  Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

                                  Max TPM 24.1
                                  Schmiedel sample id TPM
                                  19.024.529.29.539.905101520253035
                                  19.024.529.29.539.905101520253035
                                  Naive B-cell
                                  TPM: 24.1
                                  Samples: 91

                                  Max TPM: 39.9
                                  Min TPM: 9.5
                                  B_CELL_NAIVE_1 39.9
                                  B_CELL_NAIVE_2 39.9
                                  B_CELL_NAIVE_3 38.8
                                  B_CELL_NAIVE_4 38.1
                                  B_CELL_NAIVE_5 37.5
                                  B_CELL_NAIVE_6 34.8
                                  B_CELL_NAIVE_7 34.7
                                  B_CELL_NAIVE_8 34.5
                                  B_CELL_NAIVE_9 34.5
                                  B_CELL_NAIVE_10 34.1
                                  B_CELL_NAIVE_11 34.0
                                  B_CELL_NAIVE_12 32.9
                                  B_CELL_NAIVE_13 32.8
                                  B_CELL_NAIVE_14 32.4
                                  B_CELL_NAIVE_15 32.2
                                  B_CELL_NAIVE_16 32.0
                                  B_CELL_NAIVE_17 31.3
                                  B_CELL_NAIVE_18 31.1
                                  B_CELL_NAIVE_19 31.1
                                  B_CELL_NAIVE_20 30.7
                                  B_CELL_NAIVE_21 30.7
                                  B_CELL_NAIVE_22 30.5
                                  B_CELL_NAIVE_23 29.2
                                  B_CELL_NAIVE_24 29.2
                                  B_CELL_NAIVE_25 28.6
                                  B_CELL_NAIVE_26 28.3
                                  B_CELL_NAIVE_27 28.1
                                  B_CELL_NAIVE_28 27.9
                                  B_CELL_NAIVE_29 27.9
                                  B_CELL_NAIVE_30 27.7
                                  B_CELL_NAIVE_31 27.1
                                  B_CELL_NAIVE_32 27.0
                                  B_CELL_NAIVE_33 26.9
                                  B_CELL_NAIVE_34 26.9
                                  B_CELL_NAIVE_35 26.6
                                  B_CELL_NAIVE_36 25.9
                                  B_CELL_NAIVE_37 25.9
                                  B_CELL_NAIVE_38 25.7
                                  B_CELL_NAIVE_39 25.7
                                  B_CELL_NAIVE_40 25.7
                                  B_CELL_NAIVE_41 25.5
                                  B_CELL_NAIVE_42 25.4
                                  B_CELL_NAIVE_43 25.3
                                  B_CELL_NAIVE_44 25.2
                                  B_CELL_NAIVE_45 25.2
                                  B_CELL_NAIVE_46 24.5
                                  B_CELL_NAIVE_47 24.3
                                  B_CELL_NAIVE_48 24.1
                                  B_CELL_NAIVE_49 23.6
                                  B_CELL_NAIVE_50 23.4
                                  B_CELL_NAIVE_51 23.0
                                  B_CELL_NAIVE_52 22.5
                                  B_CELL_NAIVE_53 22.4
                                  B_CELL_NAIVE_54 22.3
                                  B_CELL_NAIVE_55 22.1
                                  B_CELL_NAIVE_56 22.1
                                  B_CELL_NAIVE_57 21.3
                                  B_CELL_NAIVE_58 21.2
                                  B_CELL_NAIVE_59 20.4
                                  B_CELL_NAIVE_60 20.3
                                  B_CELL_NAIVE_61 20.3
                                  B_CELL_NAIVE_62 19.8
                                  B_CELL_NAIVE_63 19.7
                                  B_CELL_NAIVE_64 19.6
                                  B_CELL_NAIVE_65 19.5
                                  B_CELL_NAIVE_66 19.4
                                  B_CELL_NAIVE_67 19.4
                                  B_CELL_NAIVE_68 19.0
                                  B_CELL_NAIVE_69 19.0
                                  B_CELL_NAIVE_70 19.0
                                  B_CELL_NAIVE_71 18.6
                                  B_CELL_NAIVE_72 17.9
                                  B_CELL_NAIVE_73 17.7
                                  B_CELL_NAIVE_74 17.6
                                  B_CELL_NAIVE_75 17.0
                                  B_CELL_NAIVE_76 16.8
                                  B_CELL_NAIVE_77 15.9
                                  B_CELL_NAIVE_78 15.7
                                  B_CELL_NAIVE_79 15.6
                                  B_CELL_NAIVE_80 15.6
                                  B_CELL_NAIVE_81 14.5
                                  B_CELL_NAIVE_82 14.1
                                  B_CELL_NAIVE_83 13.8
                                  B_CELL_NAIVE_84 12.7
                                  B_CELL_NAIVE_85 12.1
                                  B_CELL_NAIVE_86 11.7
                                  B_CELL_NAIVE_87 10.5
                                  B_CELL_NAIVE_88 10.5
                                  B_CELL_NAIVE_89 10.5
                                  B_CELL_NAIVE_90 9.6
                                  B_CELL_NAIVE_91 9.5
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